KEGG   Marivita sp. tig00000067: ACMVPR_10530
Entry
ACMVPR_10530      CDS       T11113                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
matg  Marivita sp. tig00000067
Pathway
matg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:matg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACMVPR_10530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:matg03019]
    ACMVPR_10530
Enzymes [BR:matg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ACMVPR_10530
Messenger RNA biogenesis [BR:matg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ACMVPR_10530
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 NAT10_TcmA_helicase Flavi_DEAD Utp25_C CMS1 AAA_22
Other DBs
NCBI-ProteinID: XOY48171
LinkDB
Position
complement(2142397..2143662)
AA seq 421 aa
MSDFDTLGLKPILLAALKDAGLTTPTPIQDKAIPLAMAGNDVLGLAQTGTGKTMAFGIPL
VSHLMDMPERPAAKTAKSLILAPTRELVNQIAEALRTLTKKTHLKVNVVVGGQSINKQIH
HLLKGTDILVATPGRLIDLMDRKAVDLRTVKHLVLDEADQMLDMGFIHALRRIAPKLGTP
RQTMLFSATMPKQMEDLSAAYLTNPQRVQVAPPGKAADKVTQSVHHLSKADKPAKLREIL
SRDLDALTLVFSRTKHGAEKLMKGLVADGYNAASIHGNKSQGQRDRAIKAFRDGEIKVLV
ATDVAARGIDIPGVAYVINYDLPDVPDNYVHRIGRTARAGREGEAIAFCAPDEADLLRQI
EKLMKIDVPVASGSAPKDPVARKPQTRGQGRGGKGGQSRPAGAAAKPNGNRRRRNRARKA
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
ttgtctgattttgacactctgggcctcaagcccattctcctcgccgctctcaaagacgct
ggcctcaccacacccaccccgatccaggacaaggcgattccgcttgccatggcgggcaac
gatgttctgggccttgcccagaccggcaccggcaagacaatggccttcggcatcccgctg
gtcagccacctgatggacatgcccgaacgccctgccgcgaaaaccgcgaaatcgctgatc
ctcgcaccgacccgcgaactggtgaaccagatcgccgaagcgctgcgcaccctgaccaag
aaaacccacctcaaggtgaatgtcgtggtcggtggccagtccatcaacaagcagatccat
cacctgctcaaaggcacggacattctggtcgccacaccgggtcgtctaattgacctgatg
gaccgcaaggcggttgatctgcgcaccgtcaagcacctcgtgctggacgaggccgaccag
atgctcgacatgggcttcatccatgccctgcgccgcatcgcgcccaagctcggcacaccg
cgtcagaccatgctgttctcggccaccatgccaaaacagatggaagacctgagcgcggcg
tacctcaccaatccacagcgtgtgcaggtcgcccctccgggcaaggctgccgacaaggtc
acccaatcggtgcatcacctgtccaaggccgacaaacccgccaagctgcgtgaaatcctg
tcgcgcgacctcgatgcgctcactctcgtcttctcccgcaccaaacacggcgcggaaaag
ctgatgaagggtcttgtggccgacggttacaatgccgcatccatccacggcaacaaaagc
cagggccaacgcgatcgcgccatcaaggcgttccgcgatggcgagatcaaggtgctggtc
gccacggatgtggctgcgcgcggcatcgacattcccggtgtggcctatgtcatcaactac
gatctgcccgatgtgcccgacaactacgtccaccgcatcggccgcaccgcccgtgcaggc
cgtgaaggcgaggcgattgccttctgcgcgccggatgaggcggatctgctgcgccagatc
gaaaagctgatgaaaatcgacgttcctgtggcaagcggttcggctccgaaagacccggtc
gcccgcaagccgcagacccgtggtcaggggcgtggtggcaaaggtgggcaaagccgcccc
gccggtgcggcggccaagccgaacggcaaccgccgccgccgcaaccgggcgcgcaaagcc
gcttaa

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