Marivita sp. tig00000067: ACMVPR_20330
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Entry
ACMVPR_20330 CDS
T11113
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
matg Marivita sp. tig00000067
Brite
KEGG Orthology (KO) [BR:
matg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
matg03009
]
ACMVPR_20330 (rimO)
Enzymes [BR:
matg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACMVPR_20330 (rimO)
Ribosome biogenesis [BR:
matg03009
]
Prokaryotic type
ribosomal protein modification factors
ACMVPR_20330 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
ACP_syn_III
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XOY50025
LinkDB
All DBs
Position
complement(4177808..4179181)
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AA seq
457 aa
AA seq
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MPRMSQNPPSLRPDLAPAARFSDAPRAGQPTIGMVSLGCPKALVDSERILTRLRAEGYGI
SPDYSGADAVIVNTCGFLDSAKAESLEAIGEALAENGRVIVTGCLGAEPEYITGAHPKVL
AVTGPHQYEQVLDAVHKAVPPDPDPFIDLLPASGVKLTPRHYSYLKISEGCNHKCKFCII
PDMRGLLTSRPAKAVLREAEKLVESGVRELLVISQDTSAYGTDWKDRDEKFPILSLARDL
GALGAWVRMHYVYPYPHVRELVPLMADGLVLPYLDIPFQHAHPDTLKRMARPAAAARTLD
EIAAWRDICPDITLRSTFIVGYPGETEEEFQTLLDWLDEAQLDRVGCFQYENVAGARSNA
LPDHVSDEVKQERWDRFMEKAQAISEAKLAAKVGQRLDVIIDDIDDEGIATCRTKSDAPE
IDGNLFINSGTEGLSVGEIVSVEVDEAGEYDLWGRRV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcatgtcccagaacccgccttctctccgccccgaccttgcgcctgccgcgcgg
ttttccgatgcgccccgtgcgggtcagccgactatcggcatggtctcgcttggctgcccc
aaggcgctggtggacagcgaacggattttgacgcgcctgcgggccgaaggctatgggatc
agccccgactattccggcgctgacgcggtgatcgtgaacacctgcggatttctcgacagt
gccaaggcagaaagccttgaggcgattggcgaagcgctggcggagaatgggcgcgtgatc
gtgaccggctgtctgggggcggaaccggagtatatcactggcgcgcatcccaaggtgctg
gccgtgacgggcccgcatcaatacgaacaggtgctggacgcggtgcacaaagccgtgccg
cccgatcccgatccgttcatcgacctgctgcctgcatcaggcgtgaagctgacgccgcgc
cattacagctatctgaaaatttcggaaggctgcaatcacaagtgcaagttctgcatcatc
ccggacatgcgcgggctgctgacgtcccgcccggccaaggcggtgctgcgcgaagcggaa
aagcttgtcgagagcggcgtgcgcgaattgctggtgatcagccaggacacctcggcctat
ggcaccgactggaaggaccgggacgagaagttcccgatcctgtctttggcgcgtgatctg
ggggctttgggcgcgtgggtgcggatgcactacgtctacccttacccgcatgtgcgcgaa
ttggtgccgttgatggcggatggtctggtgctgccatacctcgacattccgttccagcac
gcccatcccgatacgctgaaacgcatggcccgccccgcggcggctgcacggacgctggac
gaaatcgcggcatggcgcgacatctgcccggacatcaccctgcggtcgacctttatcgtc
ggttatcccggtgagaccgaggaggagttccagacgctgctggactggctggacgaggcg
cagctggatcgcgtcgggtgcttccaatacgagaacgtcgctggcgcccggtcgaatgct
ttgccggatcatgtttccgacgaggtcaaacaagagcgctgggaccggttcatggaaaag
gcgcaggcgatttccgaggccaaactggcggccaaggtcggccagcggttggatgtgatc
atcgacgatatcgacgacgagggcatcgccacctgccgcaccaaatcagatgcgcccgag
atcgacggcaatctgtttatcaactccggcaccgaaggattgagcgttggtgagatcgtg
tcggtcgaggtagacgaagctggcgaatatgatctgtggggtcggcgcgtctga
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