Marinomonas sp. THO17: THO17_05020
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Entry
THO17_05020 CDS
T10670
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
math Marinomonas sp. THO17
Pathway
math00260
Glycine, serine and threonine metabolism
math00630
Glyoxylate and dicarboxylate metabolism
math00670
One carbon pool by folate
math00785
Lipoic acid metabolism
math01100
Metabolic pathways
math01110
Biosynthesis of secondary metabolites
math01200
Carbon metabolism
Module
math_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
math00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
THO17_05020 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THO17_05020 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
THO17_05020 (gcvP)
00670 One carbon pool by folate
THO17_05020 (gcvP)
Enzymes [BR:
math01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
THO17_05020 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
BFM48339
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Position
539442..542303
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AA seq
953 aa
AA seq
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MTSCIRDLLNHDEFIARHIGPDANEKAKMLNSIGVDSLEQLIEKTVPEAIRLANLDMSEQ
AISEQDALVELKAIAQQNKIARSFIGMGYHDTYVPSPVLRNLLENPGWYTAYTPYQPEIS
QGRLEALLNFQQVIIDLTGMEISNASLLDEATAAAEAMTLMKRSNRKKSNLLFVADHCLP
QTIDVVKTRAELLGIDLVIDNVDKLAEHDVFGAIVQYPGLDGEVKDLAPMIESAHQQQAL
VSVAVDLLSLVLLKSPGAMGADIVFGSAQRFGVPMGFGGPHAAFLATKDTYKRSMPGRVI
GVSKDSHDQAALRMAMQTREQHIRREKATSNICTAQALLAMMASFYAVYHGPQGLKKIAS
RVAGLTHFLARQLQASGFAVNASHFDTLVIQTGDKTQFIYDKAQAKLMNFYQANDSSLSI
ALNETTKPQDIVDILACFDIATDLESIAGMTISFGIAEDLLRQDEILTHPVFNSHHSETE
LMRYMHQLEVKDIALNQSMIPLGSCTMKLNSASEMIPVTWPEFGRIHPFAPDDQVSGYHA
LLKELIAMLSKATGYDTVSLQPNSGAQGEYAGLVAIDKYHKSRGDHDRDVCLIPSSAHGT
NPASAALAGMKVVIVKCDDNGNIDLVDLAEKAEKHADQLSCIMATYPSTHGVFEEHIREV
CDTVHKFGGQVYIDGANLNALVGIAPPGSFGGDVSHLNLHKTFCIPHGGGGPGMGPIGVK
SHLAPFLPGHKVSPVLDMEEQHGAVSAAPYGSASILVITWMYIKMMGDQGLRDATHNAIL
NANYVATRLGEHYPVLYTGKNNTVAHECIIDIRPLKAESGISEEDIAKRLMDFGFHAPTM
SFPVAGTLMIEPTESENLEELDRFCDAMIQIRKEISKVQAGEWPLEDNPLVNAPHTAASL
LSVEWSHSYSREEAAYPLAWIKARKYWPPVGRIDNVYGDRNLFCECPPIDSYE
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtgcatccgcgatttgttgaaccatgacgaatttatcgctcgccacattggc
cctgacgccaatgaaaaagcgaaaatgctaaatagtattggcgttgacagtctcgaacaa
ttgattgaaaaaacggttcccgaagcgattcgtttggccaatctagacatgagcgaacaa
gccattagcgaacaggatgccttggttgaattaaaagccattgcccagcaaaacaaaatt
gcccgctcttttatcggcatggggtatcacgacacctatgttccctcacctgttttgcgc
aacttgctcgaaaaccctggttggtacacagcttatactccttaccagcctgaaatttca
caaggtcgcttggaagccttacttaacttccaacaagtcatcatcgacctcactggtatg
gaaatctctaacgcctccctgttagacgaagcaaccgctgctgcggaagccatgaccttg
atgaaacgttctaatcgcaagaagagcaatttactctttgtggccgatcactgcttacca
caaaccattgatgtggtgaaaactcgtgctgagctgctgggcattgatttggtcatagac
aatgttgacaaactggctgagcatgatgtcttcggtgctatcgtccaatatccaggcttg
gacggcgaagtaaaagatcttgcaccaatgatagaaagtgcccatcaacagcaagctttg
gtcagtgtggcagtagatctattgtcacttgtgctacttaaatctccaggtgcaatgggt
gcggacattgtttttggtagcgcacagcgctttggcgtaccaatgggctttggtggacca
cacgctgctttcttagcgacaaaagatacttacaaacgttctatgcctggccgagtcatt
ggtgtttctaaggacagccatgatcaagctgcgttgcgtatggccatgcaaactcgcgaa
caacatattcgtcgtgaaaaggccacctccaatatctgtaccgctcaagccttgctggcc
atgatggccagcttttatgcggtttatcacggcccgcaaggtttaaagaaaatcgcttcc
cgggttgctggcttaacgcattttcttgcccgtcaattgcaagcaagcggctttgctgtc
aatgcaagccactttgacaccctagtaatacaaacaggcgataaaacgcaattcatctat
gataaagcacaagcaaaactaatgaatttctatcaagcaaacgacagtagcttgtctatt
gccttgaacgaaaccaccaaaccgcaagatattgtcgacatcctagcttgttttgacata
gccacagacctagaaagcatagccggcatgaccattagctttggtattgctgaggatcta
ttacgtcaagacgagattttgacccatccggttttcaacagtcaccacagtgaaaccgaa
ttgatgcgctacatgcatcaactggaagtaaaagacatagctttaaaccaaagcatgatt
ccgttgggctcatgtaccatgaagctcaattcggcgtcagagatgattccggtcacttgg
ccagagttcggtcgtatccacccatttgctccagacgatcaggtttctggttatcatgcg
ttactgaaagaactgattgccatgctgtccaaagccactggttacgatacggtttcttta
cagcctaactctggtgcacaaggcgaatacgcaggcttggtagcgattgataaataccac
aaatctcgcggtgatcacgatcgtgatgtctgtttaatcccaagttctgctcatggcacc
aacccagcttccgcagcccttgctggtatgaaagtggtgatagtcaagtgcgatgacaac
ggcaatattgaccttgtcgaccttgctgaaaaagccgaaaaacacgctgatcaattaagc
tgtatcatggccacttacccttcaacccatggtgtatttgaagagcacattcgtgaagtg
tgtgacacggtacacaaatttggtggtcaagtttacattgatggcgccaacctaaacgct
ttggtcggtattgctcctccaggtagctttggtggcgatgtgtctcacctaaacttgcac
aaaaccttctgtattccgcacggcggtggtggccctggtatgggccccattggcgtgaaa
tcgcaccttgcacctttcctcccgggacacaaagttagcccggttttggacatggaagaa
caacacggcgcggtatccgcagccccttatggcagtgcgagcattctggtgatcacctgg
atgtacatcaaaatgatgggggatcaaggcttaagagacgcgactcataatgccatcctg
aacgccaattatgtcgccactcgtctaggggaacactaccctgtgctttatacaggtaag
aacaatacggttgctcatgaatgcatcattgacattcgccccttgaaagcagaatcaggc
atctcagaagaagacattgctaagcgcttaatggactttggcttccatgcgccaaccatg
tcttttcctgtggcaggcacattaatgattgagccaacagaatcagaaaatcttgaagag
ctggatcgcttctgcgacgccatgattcaaattcgcaaagaaatcagtaaggttcaagcg
ggagaatggcctttagaagacaacccccttgtcaatgctccacatacggcagcaagtctg
ttatcggtagagtggagccacagctactctcgcgaagaagcggcttatcctcttgcttgg
ataaaagcccgtaaatattggccgcctgttggtcgtattgataatgtttacggtgatcgt
aacctattttgtgagtgtcctccgatagacagttacgaataa
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