Marinomonas sp. THO17: THO17_05300
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Entry
THO17_05300 CDS
T10670
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_05300 (sbcD)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THO17_05300 (sbcD)
Archaeal homologous recombinant proteins
THO17_05300 (sbcD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
GEP5
Motif
Other DBs
NCBI-ProteinID:
BFM48367
LinkDB
All DBs
Position
complement(586478..587770)
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AA seq
430 aa
AA seq
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MKILHTSDWHLGQHFMGKTRREEHKAFIEWLLTVVEQESIEAVIIAGDVFDTGSPPSYAR
EMYHQLVLEMRARACQLVVIAGNHDSVSMLNESKSLLAYLDVQVISQADLSDIESHIVPL
KNRQGKEAAWLCAVPYLRPKDIVQSQSGQSEQDKKEDLLEQIKDFYLRLYQLASKRNAER
KQPLPIIGTGHLTAFGSQLSESVRDLYVGTLDTLPTSVFPPFDYLALGHIHRPQAIGNNG
CFRYSGSPIALSFDELGREKSVVIIDTNLLSKDKQVMDDLFAEQEDPVLLKKVPSFQPMV
SLQGDLQSLLTQIEYLSCEEGKTIWLEVSVVADDYLSDLHKQLMEAVEAKPIELLRVMRK
RTQGEISVTFTERQTLSELSVEEVFDRSVAASLELKDEEKSALSQLFQQCLEEMNEQTEG
DDKVEKDTVE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttacacacctcagattggcatctggggcagcatttcatgggcaaaacccgt
cgcgaagaacataaggcattcattgaatggctgttgacagtggtagagcaagagtcgata
gaggccgtgattatcgcgggggatgtgtttgataccggttcaccgccaagttacgctcgt
gaaatgtaccatcaattggtcttggaaatgcgtgccagagcatgtcagttagtggtgata
gcgggtaatcatgattctgtgagtatgctcaatgaatcaaagagcttgttagcttatctg
gatgtgcaagtcatttcccaagcggatttatcggatatagaatctcatatcgtgcccctt
aaaaaccgtcaaggtaaggaggccgcttggctgtgtgctgtgccatatttgcgtccaaaa
gacatagtgcaaagccaatctggtcagtcagaacaagataagaaagaagatttgttagag
caaattaaagacttttatctccgcctttatcagttagcaagtaagcgtaatgctgagaga
aagcagccattgcctattataggaacgggccatcttaccgcttttggtagccagctcagt
gaatcggttcgcgacctgtatgtgggcaccttggataccttgccgacatccgttttccct
ccttttgattatttggcacttggccatattcatcgaccacaagccataggaaataatggt
tgctttcgttattccggttcgcccatcgcactcagttttgatgagctgggtcgtgaaaaa
tccgtggtgattattgataccaatctattgtctaaagataagcaggttatggatgaccta
tttgctgagcaagaagaccctgtgttgctaaaaaaagtacctagttttcaacctatggtg
agtttgcaaggtgatctacaaagcttattaacacagattgaatacctttcttgtgaagaa
ggcaaaaccatttggcttgaagtgtccgtggtggcagatgactatttaagcgacctgcac
aagcaattaatggaagcagtggaagcaaagcctattgagttattaagggtaatgcgtaag
agaacacaaggtgaaatctcagtgacctttactgaacgacaaaccttatctgaattatcg
gttgaagaggtttttgatcgcagtgttgccgccagtctagagttaaaagatgaagaaaaa
agtgccttgtcacaactctttcagcaatgtcttgaagaaatgaatgaacaaacagaaggt
gatgacaaggtagaaaaggataccgtcgaatga
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