Marinomonas sp. THO17: THO17_05540
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Entry
THO17_05540 CDS
T10670
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
math03016
]
THO17_05540 (truA)
Enzymes [BR:
math01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
THO17_05540 (truA)
Transfer RNA biogenesis [BR:
math03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THO17_05540 (truA)
Prokaryotic type
THO17_05540 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
LBD_receptor
Motif
Other DBs
NCBI-ProteinID:
BFM48391
LinkDB
All DBs
Position
complement(615036..615860)
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AA seq
274 aa
AA seq
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MTKKVVLVVEYNGSAYKGWQAQKFDVPSVQESLEKALSVIANHTVKVVCAGRTDSGVHAS
AQVVHFETQAERNERAWTLGVNTYLPDDITVVAARSVADDFHARFSALTRRYRYVIYQAE
FCPAILAKGVTWTYKSLDVNRMREAAKTYIGTHDFTSFRAVGCQAHTPVRTIVNFDVQAL
GQYIVLDVRANAFLHHMIRNFAGVLMTIGAGEQPVEWAQQVLDAKDRAKGGITAPPYGLY
FVDAEYPSHFNVPVCKLGPHFLPRVDESKYELPS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgactaagaaagtggtactggtcgttgaatacaacggctcagcgtataagggctggcaa
gcccaaaagtttgatgttccaagtgttcaagaaagtttagaaaaagccttatctgttatt
gccaaccatactgttaaggtggtgtgtgcaggacgaactgattccggtgtgcatgccagt
gcccaagtggttcacttcgaaacccaagccgagcgtaatgaacgcgcttggactttgggt
gttaatacttatcttcctgatgatattacggttgttgccgcacgctctgtggccgatgac
ttccatgctagattcagcgcgttaacacgacgttatcgttatgtgatctatcaagccgaa
ttttgccctgcgattttggcaaaaggagtgacttggacctataagtctcttgatgtgaat
cgtatgcgtgaagccgcaaaaacctatattggtacccatgattttacttcatttcgtgct
gttggttgtcaggcacacacaccagtgcgtactattgtgaattttgatgtgcaggcattg
gggcaatacattgttttggatgtgcgcgccaatgcttttttacatcatatgattcgtaat
tttgcaggggtgttaatgaccataggagcaggcgagcagcctgtagaatgggcgcagcaa
gtcttggatgcaaaagacagggcaaaagggggtatcacagcaccgccttatggactgtat
tttgtggatgctgagtacccgtcacattttaatgtgcctgtgtgcaaattagggccacat
tttttaccaagggtagacgagtcaaaatatgaattgccgagttaa
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