Marinomonas sp. THO17: THO17_05670
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Entry
THO17_05670 CDS
T10670
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
math Marinomonas sp. THO17
Brite
Enzymes [BR:
math01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
THO17_05670 (srmB)
Ribosome biogenesis [BR:
math03009
]
Prokaryotic type
rRNA helicases
THO17_05670 (srmB)
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NCBI-ProteinID:
BFM48404
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Position
628429..629622
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AA seq
397 aa
AA seq
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MSFAELELDYTIVEAINSLGFDTPTEIQQQAIPVILEGSDLLATAPTGTGKTIAFCAPAV
QHVLDRDETATTAPKVLILAPSRELARQIFNVIGELTQHTRIQSQLIIGGTPYGMQQQQL
SEACDILIATPGRLVELDEKQWLDLTDVSYFVIDEADRMLDMGFVNAINHIAKELPTEHQ
TLMFSATLEGEKMGRFASALLSPDTEQIRLGESSRTVPNQIRQIAYRVDDDAHKEAILKH
LLGKEGVQQAVVFVSNRDHVDVWVQKIRNMNIMCDGLHGEMKQGDRSEHLKQMKRGRLQV
LVATDVASRGIDLPEINTVINLRLPRKADSYIHRAGRASREGAPGECISLIDINDLPMIE
KIQRFMQSNIKFGRIEGLEPKTKARSPRNKKKKKKTK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgctgaattagagctagattacacgatagtagaagcaatcaatagtctaggt
tttgacacaccgaccgaaattcaacagcaagccatccctgttattttagaaggttctgac
cttttggctaccgccccgaccggaacaggtaaaaccatcgccttctgcgccccagccgtt
cagcacgtattagacagggatgagaccgccaccacagcaccaaaagtattaattttagcg
ccaagtcgcgaattagcgcggcaaatttttaacgtaattggcgaactgactcagcataca
cgcattcaatcacagctcattattggcggcactccttacggcatgcagcagcaacaatta
agcgaagcctgtgacatcttgattgccacccctgggcgcctagtggaattggacgaaaag
caatggctggatctaaccgatgttagctattttgttatcgacgaagccgatcgcatgctc
gatatgggctttgttaatgccattaaccatatcgccaaagaattgcccacagagcaccaa
accttgatgttttcagccacccttgaaggtgaaaaaatgggccgctttgccagtgcccta
ttaagcccagatacggaacaaattcgccttggcgaatcatcacgcactgtgcccaatcag
attcgacaaattgcttatcgtgtggacgacgatgcccataaggaagcaatactcaagcat
ctgctcggcaaagaaggggttcagcaggcagtagtattcgtatcgaaccgtgatcatgtg
gatgtgtgggtacaaaagatacgtaacatgaacattatgtgtgatggcctacatggggaa
atgaagcaaggtgatcgtagcgagcatttaaaacaaatgaagcgcggtcgcttgcaagtg
ttggtcgccactgatgtggcatcgcgcggcattgatctaccggaaatcaacaccgtcatt
aacttacgcttaccacgcaaagcggactcttatatccatcgtgctggccgcgcctctcgg
gaaggtgctccgggcgaatgcatctcattgatcgacattaatgacctgccgatgattgag
aagattcagcgcttcatgcaaagcaatattaaatttggccgcattgaagggttagaacca
aaaaccaaagcccgctcaccacgtaacaaaaagaaaaagaagaaaactaagtga
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