Marinomonas sp. THO17: THO17_06240
Help
Entry
THO17_06240 CDS
T10670
Symbol
vasH
Name
(GenBank) sigma-54 dependent T6SS transcriptional regulator VasH
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
math03000
]
THO17_06240 (vasH)
Transcription factors [BR:
math03000
]
Prokaryotic type
Helix-turn-helix
Other families
THO17_06240 (vasH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA_2
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BFM48461
LinkDB
All DBs
Position
complement(689658..691208)
Genome browser
AA seq
516 aa
AA seq
DB search
MDAWLEKMTSLTVHSSSELFVHHLTKVFQQETALKAVYLLTLANDGRYFEHVNNDVYLRW
DVADFDCALAHALQSDNTMTIQGRHLDFWSSDTQLMRLLKDKQEDDWFVFYPLKIADSKV
ELFYLFHGDLSLPTRLSDPEFDQFMGVCVAYLSLLREKERLVSIKNGFIQQAHDEANHRK
VATGENNLANTIIGESLGIKKIREQIVRAAASNLTVMVLGETGTGKELVSKAVHDLSDRK
HQEFVAINCAAIPDTLLESELFGHVKGAFSGAVSDKKGLFDTAHKGTLFLDEIGDMPLNL
QAKILRVLETKRYRPVGSKQEFTSDFRLVVATHVNLREQVSKEGFRKDLFYRLYQYPIKL
ISLKERAEDIPYLAHFFIKQCNEFGHKQVAGISDQALHLLQSYDFPGNIRELKNLLQYAC
DQTDSGQLISHDTLAQRLDETSVFHHQDASDRITYPHPIESEKEITDLKEAVRQYESKIL
YTTLKKCNGNRALAAKSLGIPKRTLADKCLKLEIRL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggatgcttggttagaaaaaatgacatccttaacggtgcattctagctcagaactattt
gttcatcatctgacaaaagtctttcagcaagaaaccgctttaaaggcggtttatcttctc
acacttgctaatgacggaaggtattttgagcacgtgaataatgatgtctatttacgttgg
gatgtggcggattttgattgcgccttagcgcatgccctgcaaagcgacaataccatgacg
atacaaggtcgccatctggatttttggtcatcagacacacaacttatgcgcttgttaaaa
gataaacaggaggatgattggtttgtcttttacccacttaagatagcggacagtaaagtg
gagttgttctatttatttcatggtgacctgtctttacctactcggctttctgatccggag
tttgaccagtttatgggggtttgtgttgcttatttgagtttgttgcgagagaaagaacga
ctcgtttcaatcaaaaatggtttcattcaacaagcccatgatgaagcaaaccatcgcaaa
gtcgcaacaggggaaaataaccttgccaataccattattggtgagagcttaggcatcaaa
aaaatacgcgagcagattgtccgcgccgccgcctccaatttgaccgtgatggtgttaggg
gaaacgggcaccggaaaagagctggtgtcgaaagcggtacatgatttatcggatcgaaag
catcaggaatttgttgccattaactgcgcggccattccagacaccctattggaaagtgaa
ttatttggtcatgttaagggtgctttctctggtgctgtgagtgataaaaaaggcctgttt
gatacggcccataaaggcaccttgtttttggatgaaattggcgatatgccgcttaacctt
caggccaaaatattaagggttttagaaaccaaacgttatcgtccagtgggctccaaacaa
gagtttacgtccgactttagattggtggtggcaacccatgtcaacctgagagaacaggtg
agtaaagagggatttagaaaagaccttttctatcgtctataccaatacccgattaaatta
atttcactaaaagaaagagcggaagacataccctatttagcgcacttttttataaaacag
tgtaatgagtttggtcataaacaagttgcaggtatttcagatcaggctttacatctgctt
cagtcctatgatttccctggcaatatcagagagttaaaaaatctactccaatatgcttgt
gatcaaaccgattcaggacagttaatttctcacgacacccttgcgcaaaggctcgatgag
accagtgtgtttcatcatcaggatgcatcagacaggatcacctatccccatcctattgaa
agtgagaaggagatcacagacctaaaagaagcggtgcggcaatatgaaagcaaaatttta
tacaccacgctgaaaaagtgtaatggcaatcgagctttggcagcaaagagtttaggtatt
cccaaaagaacattggcggacaaatgtctgaagttggagattaggctgtaa
DBGET
integrated database retrieval system
