KEGG   Marinomonas sp. THO17: THO17_06330
Entry
THO17_06330       CDS       T10670                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
math  Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:math00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:math02044]
    THO17_06330 (tssC)
Secretion system [BR:math02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   THO17_06330 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: BFM48470
LinkDB
Position
complement(701153..702631)
AA seq 492 aa
MSTNTTATEGVVSEQIDGNLLDEIMAQTKIAPSEEGYDVAKKGVAAFISNLLSTDQTDEP
VNKNLVDQMLVELDRKISSQMDEILHDESIQQMESAWRGLKLLVDRTDFRENNKIDLIHV
TKDELLEDFEFAPETTQSGLYKHVYSSGYGQFGGEPTGAIIGNYAFTPSSPDMKLLQYMA
SLGAMSHAPFISSVGPEFFGVDSFEEMSNLKDLNSIFAGPKYTKWRSLRESEDARYLGLT
APRFLLRVPYDPIENPIKSFNYEENVSESHNHYLWGNTAYAFATKLTDSFAKYRWCPNII
GPQSGGAVEDLPVHVFESMGELQAKIPTEVLVTDRKEFELAEEGFIALTMRKGSDNAAFF
SANSVQKPKIFPNTKEGKEAETNYRLSTQLPYMMIINRLAHYVKVLQREQIGAWKERQDL
ERELNAWIKQYVADQENPPADVRSRRPLRGAKIEVSDVEGNPGWYQVSLAVRPHFKYMGA
NFELSLVGRLDQ
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtctacaaatactacagctacggaaggtgttgtcagcgaacaaattgacggcaattta
ttagatgagattatggctcaaactaagattgccccaagcgaagaaggctacgacgtcgcc
aaaaaaggggttgcagcctttatcagcaatcttttgagcacagatcaaaccgatgagcca
gtgaataaaaatcttgttgatcaaatgctggttgaactggatcgcaagattagttcgcag
atggatgaaatcttacacgatgagtctattcaacagatggaatccgcatggcgcggtctg
aagttgttggttgatcgtaccgattttcgcgaaaacaacaaaattgatctgattcatgtc
actaaagacgaactgcttgaagactttgaatttgcaccagaaaccacccaaagtggtctt
tataagcatgtttactcttctggctacggtcaatttggtggtgagccaactggtgccatt
attggtaactatgcctttacgccttcttctccggatatgaagttgttgcaatacatggcg
tctttgggggcaatgtcacatgcgccctttatttccagtgtggggcctgagttttttggt
gtggattcgtttgaggaaatgtcgaaccttaaagaccttaactccatttttgctggaccc
aaatataccaaatggcgttcattgagagagtcggaagatgctcgttaccttggtctaaca
gcgcctcgtttcttattgcgcgtgccttatgacccaatcgagaatccgattaagtccttt
aactatgaagagaacgtcagcgaatctcataatcactatttatggggtaatacagcatac
gcttttgccaccaaactgaccgacagttttgccaaataccgctggtgcccaaacatcatt
ggccctcaaagtggtggcgcggtagaagatttgccggtgcacgtttttgagtctatgggt
gagctgcaagcgaaaattccaaccgaagtcttggtcacggatagaaaagagtttgaattg
gcggaagaaggttttattgcccttaccatgcgaaaaggcagtgataatgcggctttcttc
tcggcaaactcggtgcaaaagccaaaaattttccctaataccaaagaaggtaaagaagcg
gaaaccaattatcgtttaagtactcaattgccatacatgatgattattaatcgcttggcg
cattacgtaaaagttttgcaacgtgagcaaatcggtgcatggaaagaacgacaggatctt
gaacgagagttgaatgcttggattaagcagtatgttgctgaccaagaaaacccaccggcg
gatgttcgcagtcgacgcccattgcgtggtgccaaaattgaggtatcggatgtggagggt
aacccaggttggtatcaagtatcattggcggttcgtcctcacttcaaatacatgggagcg
aactttgaactatcacttgttggtcgtcttgatcagtaa

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