Marinomonas sp. THO17: THO17_06970
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Entry
THO17_06970 CDS
T10670
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
math Marinomonas sp. THO17
Pathway
math03030
DNA replication
math03430
Mismatch repair
math03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THO17_06970 (dnaX)
03430 Mismatch repair
THO17_06970 (dnaX)
03440 Homologous recombination
THO17_06970 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
math03032
]
THO17_06970 (dnaX)
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_06970 (dnaX)
Enzymes [BR:
math01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THO17_06970 (dnaX)
DNA replication proteins [BR:
math03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THO17_06970 (dnaX)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THO17_06970 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_18
AAA_30
ResIII
AAA_19
AAA_2
TniB
TsaE
Rad17
nSTAND3
PIF1
RsgA_GTPase
SpoVR
Motif
Other DBs
NCBI-ProteinID:
BFM48534
LinkDB
All DBs
Position
complement(765180..767399)
Genome browser
AA seq
739 aa
AA seq
DB search
MSYQVLARKWRPQTFLEMAGQDHVLQALVNALRQQRLHHAYLFTGTRGVGKTTIARIFAK
CLNCETNGISPEPCGSCDSCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTRGR
FKVYLIDEVHMLSTHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFNLKNMS
PQRVVDYLQTVLTSEQISFDQPALWQIGQAANGSMRDALSLTDQAIAFGDGGISEAGVTA
MLGLVNQAQILDLLASVAAKNAAQVLSRIEALADYQPDFSAICGSLLDSLHRVAIEQQVP
GALADQVGDLARIQHLAQSIHPEEIQVMYQSLLIGRRDLHLAYSARAGFEMLMLRLIAFR
PAPPMTVSHEAPPTETFAAESIAAENITAEKKTPDETELSSATIRSASVTPESAVSTPLA
SVKAAPEETQIKDSQSEIVSNKTQPDAERPPWEPSAEEEPSAEKEPLAVTEEEVSAEPAH
VPEASTPEIIVPETIVPETSVSATKAQEAQQEPVTSARVESLLETSHSLNHVVDEDEEED
EEEAEERAIADVEDPFNPAADLVEALVTETEANATQDEREQAADSPLAQVPDTIAQPALA
MPLPPLNHYNELTMQTWWLVAPRLPLTGLVQNILMNSSMVDASDQGIRLQVPLEYGHMLN
QVRYEQIQQALSDFFAMPVPLIIDTVEDTEGVTAEEFAASKRAEALQVAIEHLNSHPVVQ
ALSSAMGAQLVYDSVKVKA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagttttagcacgtaagtggcgcccccagaccttccttgaaatggcgggg
caagaccatgttcttcaagctttggtgaacgctttgcgacagcagcgtttgcaccatgct
tatttgtttacgggtacgcgtggtgtgggcaaaactaccattgctcgtatcttcgcaaag
tgcttaaactgtgagaccaatggtatttcacccgagccttgcggaagctgtgacagttgt
cgagaaattgctgaaggtcgctttgttgacttgatcgaagtggatgcggcgtctcgaact
aaagtcgaagacactcgtgagctattagaaaatgttcaatatgcaccaacccgtgggcgc
tttaaagtctatctgatagacgaggtgcacatgttgtctactcattctttcaacgcttta
ttgaagaccttggaagagccacccgaacatgtgaaatttttgcttgccaccacggatcca
caaaagcttccagtgaccattctgtcacgctgtttgcagtttaacttgaagaatatgtca
ccacagcgcgtggtagattatttgcaaacggtattgaccagtgaacaaatctcctttgat
cagcctgcactttggcaaataggccaagcagccaatggcagtatgcgtgatgccttaagt
ttaacggatcaggccattgcgtttggtgacggtggcatttcagaggctggtgtgactgcc
atgttgggcttggtgaatcaggcgcaaatactggatttattggcgtcagttgccgcaaaa
aatgccgctcaggtgttatcacgtatagaagctttggccgattatcaaccggatttttct
gccatttgtggcagcttgttggattccttacatcgtgtggcgattgagcagcaagtaccg
ggtgccttagcagatcaagttggcgatttggcgcgcattcaacacttggcgcaaagcatt
catccggaagaaattcaggtgatgtatcaaagcttgctgattggtcgccgtgacctgcat
ttggcatattctgctcgtgcgggatttgaaatgttgatgttgcgcttgattgcctttcgc
cctgcgccacctatgacggtgagtcatgaggcaccgcctacagaaacttttgctgcagaa
agcatcgcagcagaaaacatcacggcagaaaaaaaaacacctgacgaaactgagttgagt
tcagcgacgataaggtcagcctcggttacacctgagtccgctgtatctacaccacttgca
tcagtaaaagcggctcctgaagagactcaaataaaggacagtcaatcagagattgtctca
aacaagactcagcctgacgccgagcgtccaccttgggagccgtcagccgaagaagagcct
tccgctgaaaaagagcctttagcggtaaccgaagaagaagtatcggctgagcctgctcat
gtccctgaggcctctacccctgaaataatcgtccctgaaacaatcgtccctgaaacaagt
gtatccgcaacgaaagcacaagaggctcagcaagagccagtcacttctgctcgagttgaa
tccttattggaaacatcacacagtttgaatcacgtggtcgacgaggatgaggaagaagac
gaagaagaagcggaagaacgtgccattgctgatgtggaagatccgtttaatcccgcggcg
gatttggttgaggctctggtaactgaaacggaagcaaacgccacacaagatgagagagaa
caagcggcggattcgcctttagcacaagtgccagacaccatagcgcaacccgctttggct
atgccattgccgcccttgaatcattataatgagctgaccatgcaaacctggtggctggtg
gcgccacgtttgcctttaacaggcttggtgcaaaacatcttaatgaattccagtatggtg
gacgccagtgatcagggtattcgtttgcaggtgccattggaatatggccacatgctgaac
caagttcgttatgaacaaattcaacaggcgctgagtgatttttttgccatgccagtgcct
ttgataattgatactgtggaggataccgaaggggtaaccgcagaagaatttgccgccagt
aagcgggcagaagccctacaggtggcaattgaacatttgaattcacatccagttgtgcaa
gccttatcgtccgcgatgggcgcacaattggtctatgattcggtaaaagttaaagcttaa
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