Marinomonas sp. THO17: THO17_07000
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Entry
THO17_07000 CDS
T10670
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_07000
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
THO17_07000
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DZR
Zn_ribbon_3
AAA_16
SLFN-g3_helicase
Zn_Ribbon_1
AAA_30
AAA_22
T1R_D3-like
ERCC3_RAD25_C
UPF0547
Motif
Other DBs
NCBI-ProteinID:
BFM48537
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Position
769567..771324
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AA seq
585 aa
AA seq
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MSQAFQLRDYQVQAVDAALTHFRHSDDPAVIVLPTGAGKSLVIAELSRLAKGRVICLAHV
KELVEQNHAKFIATGQRAGIYSAGLNQKVSDDKTVFASIQSLSANLDAFDQPVSLVIVDE
CHRIGMDDKGQYLTSLAHFQRLNPKVKILGLTATPYRLGSGWIYHKHYHGYTRPIDKPFF
THCIYELPLQHMVKQGYLTPPIHFDAAIAHYDFSLLTESLDGEQSSDDIALNELIHKYPR
VTQAICEQILQLSTDRQGVMIFAATIDHAEEILGYLPAEQSALVTGKTKQKQRDQLIQAF
KARQIKYLVNVSVLTTGFDAPHVDVIAILRPTQSISLFQQIVGRGLRLSPGKKDCLVLDY
TNNGYNIFQPEIGDKRPTNDSVAVQIHCPECDFANTFWGRKDSEGNIIEHFGRRCHGLLD
TPDGEQECQYRFKFKRCPHCNEENDIAARQCQHCGEKLLDADDMLRSALNLKDNKVLRCA
GITPEINRNDNSLKITYHDEDGLTLAETFKFQYKKSRQSFNELFARRIASGSQIIEFDKA
EQVEAFFDYLPTPDFVIAKKKKQHWQVTERLFDYQGPYRKANQLN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagcttttcaacttcgtgattatcaagtacaagccgtggatgcggcgctgacg
cattttcgtcactcagacgaccctgctgtcattgtactaccaaccggcgcgggcaagagc
ttggtgattgccgaactcagtcgcttagccaaaggccgtgttatctgcctggcgcacgta
aaagaactggtggaacaaaaccacgccaaatttatcgccacagggcaaagggctggtatt
tattctgcggggctcaaccaaaaagtcagcgacgacaaaaccgtgtttgctagcattcaa
tctttatcagccaatttggatgcctttgatcagcccgtcagcttggtcatagtggacgag
tgccatcgaattggcatggacgacaaaggacaatatttaacaagcttggcgcattttcaa
agactcaaccccaaggtcaaaattctcggtttaaccgccacgccttatcgtcttggcagt
ggctggatttatcacaaacattaccacggttatacgcgcccgatagacaagccctttttt
acacactgtatttacgaactgcccctgcaacacatggtgaaacaggggtatttaacaccg
cctatccactttgacgcggccattgcccattacgactttagcttgcttacagaaagtctg
gatggcgagcagagtagtgatgacatcgctctcaacgaactgatacacaaataccctcgg
gttacccaagccatttgcgagcaaatcttacaactcagtacagatcgacaaggggtgatg
atattcgcggccaccattgaccatgctgaagaaattctaggctatttacctgccgaacaa
agcgctctggtaacaggcaaaaccaaacaaaagcaacgagatcaactgatacaagccttc
aaagccagacaaataaagtatctggtgaatgtgtctgtgctcaccacagggtttgatgcc
cctcatgtggatgtgatcgccattttgcgccccactcaatccatcagcctgttccaacaa
attgtcggacgtggtctacgcctaagcccaggtaaaaaagattgcttggtattggattac
accaacaatggttacaacattttccaaccggaaattggcgacaagcgtcctactaatgat
tcggttgccgtgcaaatccattgccctgaatgcgattttgccaacaccttctggggacga
aaagacagtgaaggcaatatcattgaacattttggtcgtcgctgtcatggcttactcgac
accccagatggtgaacaagaatgccaatatcgctttaagttcaaacgctgcccgcattgc
aatgaagaaaacgacatcgcggctcgtcagtgccaacattgtggtgaaaaactgctcgat
gcggacgatatgttaagaagtgcactgaatctaaaagacaacaaggtactacgttgcgct
ggcatcacgccagaaatcaatcgcaatgacaacagcctcaaaatcacctatcacgatgaa
gacggtcttaccctagcggaaaccttcaaatttcaatataagaaatcacgtcaatctttc
aatgagctgtttgcgcgccgcattgccagcggcagccaaatcatagaatttgataaagca
gaacaagtagaagccttttttgactacttgcccacgcccgatttcgtcatcgccaaaaag
aaaaaacagcattggcaagtgaccgaacgcttatttgattaccaaggaccctatcgaaaa
gccaatcagcttaattaa
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