Marinomonas sp. THO17: THO17_07760
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Entry
THO17_07760 CDS
T10670
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
math Marinomonas sp. THO17
Pathway
math02024
Quorum sensing
math03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THO17_07760 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THO17_07760 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
math03019
]
THO17_07760 (hfq)
03036 Chromosome and associated proteins [BR:
math03036
]
THO17_07760 (hfq)
Messenger RNA biogenesis [BR:
math03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
THO17_07760 (hfq)
Chromosome and associated proteins [BR:
math03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
THO17_07760 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
BFM48613
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All DBs
Position
complement(858091..858336)
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AA seq
81 aa
AA seq
DB search
MSKGQSLQDPYLNVLRKERIPVSIFLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRTIRIPSPDQPEDAAE
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcaatcattacaagacccttacttaaatgttctacgcaaggaaagaata
cctgtgtcaatctttcttgtgaatgggattaaacttcaaggccaaattgaatcatttgat
cagttcgtgattcttttgaagaacacagtgagccaaatggtatataaacatgctatttca
actgtagtgccttctcgtacaattcgcatcccgtctcctgatcagccggaagatgccgct
gaatag
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