KEGG   Marinomonas sp. THO17: THO17_10130
Entry
THO17_10130       CDS       T10670                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
math  Marinomonas sp. THO17
Pathway
math00550  Peptidoglycan biosynthesis
math01100  Metabolic pathways
math01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:math00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    THO17_10130 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    THO17_10130 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:math01011]
    THO17_10130 (mrdA)
Enzymes [BR:math01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     THO17_10130 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:math01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   THO17_10130 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer ULD_2 PBP_dimer_2
Other DBs
NCBI-ProteinID: BFM48850
LinkDB
Position
complement(1111279..1113159)
AA seq 626 aa
MSRQHQQFRNYRQEQRLTQNRVIAAAIFVLLLASTLMARLFYLQVIEYELYQTKADDNRV
MLVTEPPPRGLIYDRHGLVLADNRPIHSLTVTPERVDNFVDLKEELSKIIDISDNEWENF
EDRLKEYRRPYQSITLKSQLTDEEWARVSVDLYRLDGVQVEAQLTRYYPYGEAFAHAVGY
VGRITASDLEKVDKQAYQGALFIGKTGIEGYYEKALFGEAGFRKVEVNARGRIMSQLEQQ
SPIPGKDLHLYLDARLQQYAYDLLGDYKGAVVAIDPKNGGVLALVSKPGFDPNLFVRGIS
VADYSELRQSKKLPLFNRALRGGYPPASTIKPFMALAGLDYGFASWTERYFAKGYYQINP
DGRRYRDWKRSGHGWIDLERSIIESVDTYYYQLANKMGITPIHSFLSLFGFGRSTILDLN
GDSTGLLPSNEWKKAKYKEPWYPGDSVNVGIGQGFMVATPMQIASATSALASRGRYFYPR
MAETLGDQPVEFEDDLGGEHDIILKDQRNWEKMVKAMRKVITDSLGTARRLQGTEYVIAG
KTGTGQVFSLQEDEEYDSEKLDKRLHDHALFIGFAPAEDPKISVFAIFENGGSSSKPADL
TKKLFDAYLYDKYPAHYDYLKGNDNE
NT seq 1881 nt   +upstreamnt  +downstreamnt
gtgagccgtcaacatcagcaatttcgtaattaccgtcaggagcagcgtttaactcagaat
cgagtcattgcggctgccattttcgtgctcttgttggcctctactttgatggctcgtctc
ttttaccttcaggtcatagaatacgagctatatcaaaccaaagcggatgataaccgcgta
atgctggtcaccgaaccaccgccgcggggactgatatatgaccgtcatggtttagtgtta
gcagacaatcgtcctattcacagtttgaccgttacacctgagcgggtggacaattttgtc
gatctaaaagaagagttgtctaaaatcatcgacatttcagacaatgaatgggaaaacttt
gaggatcgccttaaagaataccgccgtccttatcagtctattacattaaaatctcaacta
accgatgaagaatgggctcgcgtttctgttgatttgtatcgcttagatggggtgcaagtc
gaagctcaattaactcgctattatccttatggtgaagcctttgcccatgcggtgggctat
gtgggccgtattactgcaagtgatctagaaaaggttgataagcaagcttatcaaggtgcc
ttgtttatcggtaaaacaggtatagaaggctattacgagaaagccttgtttggtgaagcg
ggctttcgtaaggtggaagtgaatgcgcgtggtcgcatcatgtctcaattagagcaacag
tcacccattcctggaaaagatctgcatttgtatttagacgccagattacagcaatacgct
tatgatttactgggtgattataaaggggctgtggttgccattgatccaaaaaatggtggg
gtattggctttagtgtcgaagccgggttttgatcctaacttgtttgttcgtggtatttct
gtagcggattattcagaattaagacagtcgaaaaagctacctttgtttaaccgagcctta
cgtggtggttatccaccagcctcaaccattaaaccctttatggcgctggcgggactggat
tacggttttgcttcatggacagaacgttattttgccaaaggctattatcaaatcaaccca
gatgggcgtcgttatcgtgactggaaacgtagtggtcatggctggattgacctagagcgc
tctattatcgaatcagtggatacctattattatcagctggcgaataagatgggcattacg
cctattcatagttttttatctttatttggctttggtcgcagtaccattttggacttaaac
ggtgatagtacaggcctattgccatccaatgagtggaaaaaagccaaatacaaagagcct
tggtacccaggagactcggtaaatgtgggtatcggtcagggctttatggtggcaacacct
atgcaaattgcctcagctacatctgcattggcgagccgaggacgttatttctatccacgt
atggctgaaactttgggtgatcagccagttgaattcgaagacgatttaggtggtgagcac
gatattattctaaaggatcagcgtaattgggaaaaaatggttaaagccatgcgtaaggtg
attaccgattcactaggaacggcgcgacgtttacaaggaactgaatatgttattgctggt
aaaacgggtactgggcaggtatttagtttgcaggaagacgaagagtatgactctgaaaaa
ctggataagcgtttacatgatcatgccttattcatcggctttgcgcctgctgaagatcct
aaaatttcggtatttgccatctttgaaaacggtggtagcagttcgaaaccggcggattta
acgaaaaagttatttgatgcgtatctttatgataaatatccagcccactatgactactta
aaagggaatgataatgagtga

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