Marinomonas sp. THO17: THO17_15140
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Entry
THO17_15140 CDS
T10670
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
math Marinomonas sp. THO17
Pathway
math00541
Biosynthesis of various nucleotide sugars
math01100
Metabolic pathways
math01250
Biosynthesis of nucleotide sugars
Module
math_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
math00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
THO17_15140 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
math01005
]
THO17_15140 (rfaD)
Enzymes [BR:
math01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
THO17_15140 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
math01005
]
Core region
THO17_15140 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
KR
ThiF
Polysacc_synt_2
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
BFM49351
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Position
1638227..1639174
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AA seq
315 aa
AA seq
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MYIVTGGAGFIGSNIIKALNNRGITNIVLVDDLTDGKKCLNLSDLDIADYMDMYDFLEAI
KQDSLAMDVTAVFHEGACSATTEWNGKYVMDVNYQYSKAVLAFCSKHNIPFSYASSASVY
GSGPVFEEARQYEKPLNMYAYSKFQFDQYVRSILPTAKHQIVGFRYFNVYGPREQHKGSM
ASVAFHLRNQVLADENPKLFGAYDGYEAGGQSRDFIYVEDLVNTKLWFLDNPDKSGIFNL
GTGKAEPFRTIAETVIEHYGKGEIEYIPFPEHLKGAYQSFTQADITKLRETGYKGSFRGL
AEGVKDYLGWLDNHG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatattgttactggcggcgcgggctttattggcagcaacatcatcaaagccttaaat
aatcgaggaattactaatatagtattggttgacgacttaactgatggtaaaaaatgccta
aatttgtccgatcttgatattgccgattacatggacatgtatgattttttagaggcgatc
aagcaagactctttagcaatggatgtgactgccgttttccatgaaggagcctgctcagcg
accacagaatggaatggcaaatatgtcatggatgttaactatcaatactccaaagctgtt
ctcgcattttgttcaaaacataatattccattctcttatgcgtcttcagcttcggtatat
ggctcaggtcctgtctttgaagaggcaagacaatatgaaaagccattgaacatgtatgct
tactctaagtttcaatttgatcaatacgttcgatccattcttcctacagctaaacatcag
atagtgggctttcgttacttcaacgtatatggcccaagagagcaacataaaggcagcatg
gcaagtgtcgcttttcatttacgtaatcaagtattagcggatgagaatccaaaattattt
ggtgcttatgatggctatgaagctggtggtcagagtagggatttcatatacgttgaagat
cttgttaataccaagctgtggtttttagataaccctgataagtctggaatattcaacctt
ggcacaggcaaagcagagccatttaggaccattgcagaaacagttatcgagcattatggt
aagggcgaaattgaatacattccattccctgagcatctaaaaggcgcctatcagagcttt
actcaagcagatattaccaaactaagagagactggctataaaggttcatttagaggtttg
gcagaaggagtcaaagactacttaggttggttagataatcatggttaa
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