Marinomonas sp. THO17: THO17_16030
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Entry
THO17_16030 CDS
T10670
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
math Marinomonas sp. THO17
Pathway
math03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
THO17_16030 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_16030 (xseA)
Enzymes [BR:
math01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
THO17_16030 (xseA)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
THO17_16030 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
HTH_1
DUF4192
Motif
Other DBs
NCBI-ProteinID:
BFM49440
LinkDB
All DBs
Position
1747972..1749321
Genome browser
AA seq
449 aa
AA seq
DB search
MKNFTTSHSQETALTVSQLNRQIQQLLEASLPWILVEGEISNLAKPGSGHWYFSLKDDRA
QIHCAMFKNKNIAVRFRPKDGDMVRLRARVTFYGPRGDCQLSVEGMESAGEGALQQAFER
LKNQLQAEGLFDEAHKKHLPVRPERVAIITSPVGAAIRDMIIAFRRRFPLTELTILPSLV
QGQDAANNLLKQLTRADASGHFDAIILGRGGGSLEDLWSFNDEALARAIFHAQTPIVSAV
GHETDFTIADFVADVRAATPTAAAELLSPDRHQLIRQLEQMEKQFGLRLSRKLEQCQQQL
DFLIRRIRHPKERIERQQQQLNQLQRRLQQAVTQKLNQQQVRTTNIQQRLLHNNPSKKLQ
QHDAKIQDLNARLSLALRNTLTNKQHQFARLMDKLNLVSPLNTLSRGYAIARKDEQVVRS
ISEVNQGENMSVRVQDGIIFCRVEDTKPS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattttacaactagccactcacaagaaacggcattaaccgtctcgcagttaaat
agacaaattcaacaacttttagaagccagtttgccttggattttagtggaaggtgagatc
tctaatttagccaaacctggttctggccattggtatttttccctaaaggatgatcgtgct
caaattcactgcgccatgttcaaaaacaaaaatatagcagtacgttttcgtcccaaagat
ggtgacatggttcgtttgcgtgcccgtgtaactttttatggccccagaggcgattgccag
ctcagtgtggaaggcatggaatccgctggggaaggcgcattacaacaagcttttgaacgt
ttaaagaaccagttacaagcagaaggcttatttgatgaagctcacaaaaaacatttaccc
gttcgcccagaacgggtcgctattatcacatcaccagtcggtgccgcgattcgcgatatg
attatcgcttttcgtcgtcgcttcccgctcacagaactgaccatattaccctcattagtt
caaggacaagatgctgcaaacaacctactcaagcagttaactcgtgccgatgccagcggt
cattttgacgccattattctaggccgtggtggcggctccttggaagacttgtggagcttc
aatgacgaagccctggcgcgcgccattttccatgcccaaacccccatagtctctgccgtt
ggtcacgaaaccgatttcaccatagcggatttcgtcgccgacgttcgtgctgccacccca
acggcagcggcagagttactcagtcccgaccgccatcagctgattcgccaattagagcaa
atggaaaagcagttcggcttacgcttatcacgcaaacttgaacagtgccaacaacaatta
gattttttgattcgtcgcattcgtcatccaaaagaacgcatagagcggcaacaacagcaa
ctaaatcagctacaacgacgcttacaacaagcggtaacgcaaaagctcaatcagcagcaa
gtgcgaacaaccaatatccaacaaaggttgctgcacaataacccaagtaaaaaattgcaa
cagcatgatgccaaaatccaagacctgaacgctagattaagcttggcacttcgcaacacc
ttaaccaataagcaacatcaatttgctcgtttgatggacaagcttaatttggtcagcccg
ctaaacaccctttctcgaggttacgccattgccagaaaagacgagcaagtggttcgctct
ataagtgaagtaaatcaaggtgaaaacatgagtgttcgtgtacaagacggtatcatattc
tgtcgcgttgaggacactaaaccaagttaa
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