Marinomonas sp. THO17: THO17_17540
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Entry
THO17_17540 CDS
T10670
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_17540 (radA)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
THO17_17540 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
RecA
Lon_C
AAA_22
SLFN-g3_helicase
ABC_tran
GvpD_P-loop
AAA
nSTAND3
AAA_24
AAA_16
AAA_14
NTPase_1
AAA_30
AAA_29
DUF6549
cobW
Zeta_toxin
AAA_19
KdpD
Rad51
DZR
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BFM49591
LinkDB
All DBs
Position
1901481..1902866
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AA seq
461 aa
AA seq
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MAKAKTAFVCNECGADYAKWQGQCQACGAWNSLSEIRLTSRKTSARVAASQDTRTLGYAG
ATTGIQDLSEVDLADVPRFSSGANEFDRVLGGGLVPGGVVLIGGHPGAGKSTLLLQTMCW
LAQQQSALYVTGEESLQQVAMRAKRLGLPTQNLKMLSETNVEAILNVAQQVKPKVIVIDS
IQVMHLDGIESAPGSVSQVRESAAVLTRFAKQTQTAVLLVGHVTKDGTLAGPKVLEHMVD
CSVLLEGSEDSRFRTLRGMKNRFGAVNELGVFAMLENGLKEVKNPSSIFLNRSNHPAAGS
LVMVVWEGTRPLLVELQALVDDSALGNPRRVTVGFDHNRLAMLLAVLHKHGGLLTADQDV
YLNVVGGVKVLETSADLAAIAAVVSSFRDQVLPHDLVVLGEVGLSGEIRPVPSGQERISE
AAKHGFTKAVVPKANCPKKSIDGMKVIGVERLSEALEAIFG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcgaaaaccgcctttgtctgcaatgaatgcggtgcagactacgccaaatgg
caaggccaatgtcaggcctgtggcgcatggaattcactttcagaaatacgcctaacttcc
agaaaaacttcagcacgagtagcggccagccaagacactagaaccctaggttatgccggc
gcgactacaggtattcaagacttatccgaagtggatctggccgatgtaccacgcttcagc
tcaggagcaaatgaatttgaccgagtattagggggcggtttagtgccaggaggcgtggtg
ttaattggtggtcacccaggggcaggcaagagtacgttattgctgcaaaccatgtgctgg
cttgcgcaacaacaaagtgcactctatgtaacgggggaagaatcactacagcaagttgcc
atgcgtgccaagcgtcttggtttacctacacaaaacctcaaaatgctgtctgaaacgaat
gttgaagccattctcaatgtagcacaacaagtaaaacccaaagtcatcgtcattgactca
atccaggtcatgcatttggatggtattgaatctgcaccagggagtgtgtcgcaagttcgt
gaaagcgctgctgtactgacccgctttgccaagcaaacacaaaccgccgtcttgctggtt
gggcatgtaaccaaagacggtaccttggcaggaccaaaagtgttggaacacatggtagat
tgttcggtattactagaaggctcggaagattcacgttttcgcaccttacgtggtatgaaa
aaccgctttggggcagtaaacgagctaggggtttttgccatgttggaaaacggcttgaaa
gaagtcaaaaaccccagttctattttcctcaatcgtagcaatcatccggcagcaggtagt
ttagttatggtggtgtgggaaggtactcgtccactactcgttgaactgcaagccttagtg
gatgattccgctcttggtaatccaaggcgtgtcacagtaggttttgatcataatcgtttg
gccatgttactcgctgtacttcacaagcacggcggcttattaacggccgatcaggatgta
tacctaaatgtggtgggtggcgtcaaagtattagaaaccagcgcagatttggccgctatt
gcagctgtcgtatccagtttccgtgatcaagtattaccgcacgacttggtcgtactagga
gaagttggcttgtcgggcgaaattcgtccggttccctctgggcaagaacgtattagtgaa
gctgcaaaacatggctttactaaagccgttgtaccaaaagccaattgtccgaaaaaatcg
attgatggtatgaaagtcataggagtagaacgtctctccgaagccttagaagctattttc
ggttaa
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