Marinomonas sp. THO17: THO17_18230
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Entry
THO17_18230 CDS
T10670
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
math Marinomonas sp. THO17
Pathway
math02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
math00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
THO17_18230 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
math02000
]
THO17_18230 (rhaS)
Transporters [BR:
math02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
THO17_18230 (rhaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
BFM49660
LinkDB
All DBs
Position
complement(1976918..1977910)
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AA seq
330 aa
AA seq
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MKTKLITVLLACATLFTSGAYAADQVRVALLVKALGIGFFEAAYRGAEEASKELGDVEII
YTGPTSTTAEGQIEIINSLIAQRVDAIAVSANDADALVPSLRKAQQRGIKVISWDSGVGK
AGRQIHLNPSSNSLIGEMNVQLAADAIKVKGKSSGTFAILSATPTSTNQNIWIDEMKKSL
SKFPNLTLVDTVYGDDLADKSFREATALIKNYPDLDVIVAPTTVGILAAAQAVSDMGLTG
KVYVTGLGLPSELAGHVQSGAIHSFAIWNPIDLGYSATMLAYNLVKGEGSKTQVPMGRMG
TLEVDSNGDGAMAKPFVYDASNVDQFSSIF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaactcatcactgtgttgctggcttgtgctactttatttacttctggtgcg
tatgctgccgatcaggttcgcgttgcgctcttagtaaaggctttgggaattggctttttt
gaagcggcttatcgtggcgcggaagaggccagcaaagaacttggcgatgttgaaattata
tatacaggcccaacgtcaaccacggcggaaggccagattgaaatcatcaattctttaatc
gctcaacgtgttgatgccattgctgtgtcagcaaacgatgctgatgctttagtgccctcc
ctaagaaaagctcaacaacgtggtattaaagtcatttcttgggattcaggtgttggtaaa
gccggtcgacaaattcatctaaacccttctagtaatagtttgattggcgaaatgaacgta
caacttgccgctgatgccattaaagtgaaaggcaaatcttcaggtacttttgccatccta
agtgcgacccctacttcgaccaaccagaatatctggattgatgaaatgaaaaagtctctt
agtaaattccctaatttaacattggttgatacggtttatggtgatgacttggcggataaa
agtttccgtgaagcaaccgctttgattaaaaattatccagacctagacgtcatcgtagca
cctaccacagtaggtatcttggcggcagcacaagctgtgagtgacatgggtttgactggt
aaagtctatgtcacagggttaggtttgccctcagaattagcgggccatgtacagagtggc
gccattcacagtttcgccatttggaatccaattgatctaggttactcggccactatgctt
gcttacaatctggtaaaaggtgagggtagcaaaactcaagtgccaatgggacgtatggga
acacttgaagttgacagcaatggtgacggtgcgatggcaaaaccttttgtttacgacgcg
tctaacgttgatcaattctcttctattttctag
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