Marinomonas sp. THO17: THO17_19050
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Entry
THO17_19050 CDS
T10670
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
math03000
]
THO17_19050
Transcription factors [BR:
math03000
]
Prokaryotic type
Helix-turn-helix
LysR family
THO17_19050
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_Mga
STPPase_N
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BFM49742
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Position
2068954..2070162
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AA seq
402 aa
AA seq
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MEASIPNLRHLRVFLAVTELKSITRASDSIFLSQPAITQAIAKLESSLGTLLFERHSDGM
YPTASGEIWQKRVSRAINHIQTATQDIVKDNKDTAPKNLVALISTTQLRALVAVSEAQNF
SIASRNLAVSQSSVHRAARDLERLLGVTLFEKNSLGTSATKAAQTLAKATKLAFSELRQG
IHEINALQFKDVSTITIGSMPLARMTILPKSILRFNERHPDVNIKVTEGPYSDLLHHLRQ
GDIDIILGALRYPSPADDVIQEELWSPPLSIIARKDHPLLQHQQIDAQQLAQYSWVVPTE
GTPTRQAFEDIFADAKIPLPARLVESSSQILIRELLLESDRLTLMSAHQVEREINIELLS
VIPFPLEHTRRPIGLCVRKSWLPTLTQSHFLSLLREISEQVR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatccattccaaacttaaggcacctacgcgtgtttttggcggtgaccgaacta
aagagcattactcgcgcttcagacagtatctttctgtcacaaccagcgattactcaggcc
attgctaaattagaatcctccctaggcaccttgctgtttgaacgtcattcagacggcatg
tacccaaccgcctcaggggaaatttggcaaaaacgcgtcagccgcgccattaatcatatt
caaacagccacccaggacatagtgaaagataacaaagacacggcacccaaaaacctagtc
gctctcatcagcaccacccagttacgtgccttagtggcagtcagtgaagcgcaaaacttc
agtattgctagccgtaatttagctgtgtctcaatcttctgtacatcgtgccgccagggac
ctagaacgtttactgggtgtgaccctttttgaaaagaacagtctcggcacgagcgccacc
aaagctgcacaaacactggctaaagccaccaaattagctttcagtgaattacgccagggc
atacacgagatcaacgccttgcaatttaaagacgtgagcaccatcaccatcggcagcatg
ccattggcacgtatgaccattttacccaaatccattttgcgatttaatgaacgacatcca
gatgtcaatattaaagtaacagaagggccttatagcgatttacttcaccatttacgtcaa
ggtgatattgatatcattttgggcgccttacgctatccatcaccggcggatgatgtgatt
caagaagagctttggtcaccccctttgtccatcattgctcgtaaagatcatccgttactt
caacaccagcagatcgacgcccaacaattggcacaatattcttgggtcgtacccacagaa
ggcacaccgactcgacaagcctttgaagacattttcgctgatgccaagattcctttacca
gcacgcttggtagagtccagttcacaaattttaatccgtgaattattgttggaaagtgac
cgtctaaccctaatgtctgcacatcaagtggagcgagaaattaatattgaattactcagc
gtcattccttttccattagaacatacgcgtcgtccaatcggactatgtgtgcgaaaaagc
tggcttccaaccctcacacagtctcattttttaagcctactaagggagatatcggagcaa
gtacgttaa
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