Marinomonas sp. THO17: THO17_21310
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Entry
THO17_21310 CDS
T10670
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_21310
Enzymes [BR:
math01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
THO17_21310
DNA repair and recombination proteins [BR:
math03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
THO17_21310
Prokaryotic type
THO17_21310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BFM49968
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All DBs
Position
2297069..2298586
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AA seq
505 aa
AA seq
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MTQACLPETSLAPVVVWFKRDLRLTDHEPLQQAINSQRPVILFYVFEPSLVADEHYDERH
WRFVWQSLMDMQTQLTPYQAKLYIDYQEALAALTSLHQTTSFQALYSSEEIGLGLTFERD
IAIKKWCQKAQISWHEFPTGAVIRGLKNRDTWDQAWQQVMRQPIAETALEKASWHQMTPP
NIAIPKPWQTSQKGLQTGGSTLAWKTLTSFYEERGQYYYSSLSSPLTSRSACTRLSPYLA
WGNISLREVYQDLLTRWHTKGWRRTLIALSSRLHWHCHFMQKFESECRMEYQPVNQAYHA
FPYRNDEQIWPDFERWYLGKTGYPMIDACMRALHATGYINFRMRAMLVSFLCHHMNLDWR
MGVKPLARLFLDFEPGIHYPQFQMQASVTGTNTIRIYNPVKQSQDQDPEGDFIRRWVPEL
NQLPAPLIHTPWHMSPMEEALYDCQLGNDYPHPILNLEEAAKSARERLWGFRKRPEVSAE
KQRILATHVRSPNSKTKSKTQNKRS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcctgcttacctgaaacgtctttagcgcccgtagtggtttggtttaaacgt
gacttgcgtttaaccgatcatgagcctttacaacaggccatcaacagccagcgtccggtc
attttattttatgtgtttgaaccaagcttggtcgctgacgaacactatgatgaacgtcac
tggcgctttgtatggcagtccttaatggacatgcaaactcagctaacaccttaccaagcc
aagctctacattgattatcaagaagcgttagcagccttaacaagccttcaccaaacaacc
tcctttcaggcgttatacagcagtgaagaaattggcttaggactaacttttgaacgggat
attgccataaaaaaatggtgccaaaaagcgcaaataagctggcatgaatttccaaccggt
gctgtgattcgagggttgaagaatcgggatacttgggatcaagcttggcaacaagtcatg
cgccaacccattgccgaaacggcactagaaaaagcctcttggcaccagatgactccacct
aatattgctatcccaaaaccttggcaaacgagtcaaaaaggcttgcaaaccggtggcagc
acacttgcttggaaaactctgaccagcttctatgaggaacgtgggcaatattattattcc
tccttatccagcccgctaaccagccgctccgcctgcaccagactttcgccctatttggca
tggggcaacatcagcttgcgagaagtgtatcaagacctattaactcgctggcacaccaaa
ggctggcgacgcaccttgattgctttgagttcacgattgcattggcattgccactttatg
cagaagtttgaaagcgagtgccgcatggaatatcaacccgtcaatcaggcttatcacgct
tttccctatcgcaatgacgaacaaatttggccggactttgaacgctggtatctcggtaaa
acaggctaccctatgatagatgcttgtatgcgcgccttacatgccacgggctacatcaac
tttcgtatgcgtgccatgctggtgagttttctttgtcaccatatgaatctggattggcgc
atgggcgtgaagccgctcgctaggctctttctcgactttgagcccggcattcactaccca
cagtttcaaatgcaggcctcggtgacgggcactaataccattcgcatctataatccggtg
aaacagtcacaagaccaagatcctgagggggactttatccgtcgctgggtgccagaatta
aatcagctacctgccccactgatccatacgccttggcacatgtccccaatggaggaagcc
ctctatgactgtcaacttggcaatgactatccgcatcctatactcaacttagaagaggcg
gccaaatccgctcgtgaacgtttatggggatttcgaaagcggcctgaagtaagcgcagaa
aaacaacgaatattagccacccatgttcgttcacctaatagtaaaaccaagagcaaaact
caaaataagaggtcttaa
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