Marinomonas sp. THO17: THO17_21320
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Entry
THO17_21320 CDS
T10670
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_21320
Enzymes [BR:
math01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
THO17_21320
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
THO17_21320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
BFM49969
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Position
2298586..2300136
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AA seq
516 aa
AA seq
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MSQFHTLRLILGDQLNASHSWFKQTDSGVLYLIAELHSEAHYVKHHIQKITAFFLAMQGF
ANALQQAGHKVCHLTLDDTKGLSLSDLLTQQADKIGAQTIQYQRPDEYRLLRQLEDYQNT
SSVPVESFDTEHFLLPFAEIPHHFKAKHTVRMEHFYRKMRQRFDILMTAEGQPEGGKWNY
DANNRNKLKKQDLADIPEPLCFQHPVDDIVARLKQHQIPCFGQIGSYLSWPVTRREAHQL
LDYFCQHLLPNFGRFQDAMTDQSEHAWSLYHSRLSFALNSKLIHPMNVIQAAIGQFRQNP
KIDLSQIEGFVRQILGWREYVRGMYWINMPDYRQQNALDAQRDLPEYFWTGETKMNCLSQ
AIHQSLEFAYAHHIQRLMVTGNFCLLTGIEPQQVDDWYLGIYIDAIEWVELPNTRGMSQF
ADGGWIASKPYAASGSYTHKMSDYCSSCHYQVKEKISEQACPLNSLYWRFMVKHRDWLSK
NPRIGMIYGNWDKQTTDQQQAVLDKADWCLQHIEQL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttcacacccttcgtttgatattgggcgatcagctcaacgccagccactct
tggtttaaacagaccgattctggtgtgttgtatctgattgccgaattgcactctgaagcc
cactatgtgaaacaccacatccaaaagatcaccgccttctttttggccatgcaaggtttt
gctaatgccttgcaacaagcaggacataaggtctgccatctcactttggacgatacaaaa
gggctcagcctaagcgacttactaacccagcaagcagacaaaataggtgctcagactatt
cagtatcaaagaccggatgaatatcgcttactcagacaattggaggattatcaaaacacc
tcttctgttccagtagagagctttgatactgagcactttttattaccatttgcggaaatt
ccccatcatttcaaagccaaacacactgtacgcatggagcacttttaccgaaaaatgcgc
caacgctttgatattttaatgacggcagaaggccaaccagaaggtggcaaatggaactat
gacgccaataatcgcaacaagttaaaaaaacaggatttagccgacataccagagccattg
tgttttcagcaccctgttgacgatattgtggcgcgcctcaaacaacaccagataccttgt
tttgggcaaataggatcgtacctcagttggcctgtaacacgtcgtgaggcccatcaatta
ttggattatttttgccaacatctgttgcccaattttggacgttttcaagatgccatgact
gaccaatccgaacatgcatggagcctgtatcattcgcgcctatcttttgcgctcaacagt
aaattgattcaccctatgaacgtcatacaagccgctatagggcaatttcgccaaaaccct
aaaatagatttatcgcaaatcgaaggttttgtcagacagatccttggctggcgagaatat
gtacgcggcatgtattggataaacatgccagactatcgccaacaaaatgccctcgatgct
caacgagacttgcctgagtatttttggacaggggagaccaagatgaattgtttatcgcaa
gccattcatcagtccctcgaatttgcctacgcacatcacatccaacgcctcatggtgaca
ggtaatttttgtctgctgacaggcattgagccccagcaagtagacgattggtatttgggc
atttacatcgatgccatcgaatgggtggaattaccgaacactcgtggtatgagtcaattt
gccgacggcggttggattgcctctaaaccttacgcagcaagtggcagctacacgcataaa
atgagtgactattgctcctcatgccattaccaagtgaaagaaaagatcagcgagcaagct
tgcccactcaacagtttgtattggcgttttatggtcaaacatcgagactggctgagtaag
aacccgcgcattggcatgatatatggcaattgggataagcaaacaaccgatcagcaacag
gctgtgttagacaaggctgattggtgtttgcaacatattgagcagctgtga
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