Marinomonas sp. THO17: THO17_21590
Help
Entry
THO17_21590 CDS
T10670
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
math Marinomonas sp. THO17
Pathway
math03030
DNA replication
math03410
Base excision repair
math03420
Nucleotide excision repair
math03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THO17_21590 (polA)
03410 Base excision repair
THO17_21590 (polA)
03420 Nucleotide excision repair
THO17_21590 (polA)
03440 Homologous recombination
THO17_21590 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
math03032
]
THO17_21590 (polA)
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_21590 (polA)
Enzymes [BR:
math01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THO17_21590 (polA)
DNA replication proteins [BR:
math03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
THO17_21590 (polA)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
THO17_21590 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THO17_21590 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
Mannitol_dh
HHH
Motif
Other DBs
NCBI-ProteinID:
BFM49996
LinkDB
All DBs
Position
2322819..2325587
Genome browser
AA seq
922 aa
AA seq
DB search
MATDSAQQNTPMILVDGSSYLYRAFHAIPPLTTSQGQPTNAARGVISMIRSLIKNYPSSP
IVVIFDAKGKTFRDEIYSEYKAQRPPMPDELRLQIEPIHRMIEAMGLPLIIIDGVEADDV
IGTIAKQVGETGRDVIVSTGDKDMAQLVTDKVTLVNTMTDTVMDIQGVKDKFGIPPELII
DYLALMGDKVDNIPGVPGVGEKTALALLQGLGSIDDIYQRLDEIAALGFRGSKTMKQKML
DNKDMAELSYTLATIKCDVELPFNALELTNNQADKEALREWFTKLEFKTWLKDLDKAPSV
DNPDDTVGNLDGQATASKSDIQVQYDTILDKASFTSWFEAIQQADLVAFDTETTSLNYMA
AELVGVSFSIEAGKAAYLPLAHDYEGAPEQLDRDWVLEQLKPWLEDETAAKVGQHLKYDA
NVLNNYGIRLGGIIYDTMLESYVFNSVSSRHDMGSLAEKFLDHKCVSFEDIAGKGAKQKT
FNQIDLEQAAFYAAEDADITLRLHQAIWPQLEKTPELVSIFKDIECPLVPVLAKMEQTGA
LIDPELLHAQSSEIATKLQELEIKAHEEAGESFNLSSPKQLQVILFEKLELPIIKKTPKG
QPSTAEPILQELAENYELPRIIMEHRSLSKLKSTYTDKLPEMLQKTGRIHTSYHQAVTAT
GRLSSTDPNLQNIPIRTAEGRRIRQAFIAPEGYKLVAADYSQIELRIMAHLSQDKGLLDA
FANNADVHRATAAEVFESTAEEVTTEQRRRAKAINFGLIYGMSAFGLAKQLGIARPEAQK
YVQRYFERYPGVRTYMDNTREQAKEKGFVETIYGRRLYLPDIKAKNAMMRQAAERTAINA
PMQGSAADIIKRAMIQMHNWLADTDLDVRMIMQVHDELIFEVAEKDLAAAQEKIVEIMQN
SSKIDVPLLVEAGVGDNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ttggctacggattctgcacaacaaaacacgcccatgatcttagtagatggctcatcttat
ttatatcgagctttccatgcgattcccccactgaccaccagccaaggccaacctaccaat
gccgctcgcggtgtgatcagcatgattcgtagcctaatcaaaaattacccaagttcacct
atcgtggtgatttttgatgccaaagggaaaacctttcgcgacgagatttacagcgaatac
aaagcacaacgtcctcctatgccagacgaattgcgtctgcaaattgagccgattcatcgc
atgattgaagccatgggactgccacttatcatcattgacggcgtcgaagccgatgacgta
attggcaccatcgccaaacaagtcggtgagacagggcgcgacgtgattgtctccacgggg
gataaagacatggcgcagctggtcaccgacaaagtcaccttggtaaacaccatgacagac
acagtcatggacatccaaggggtgaaagacaaattcggcattccacctgaattaatcata
gattatctggcactcatgggcgataaggtagataacattcctggcgtaccgggcgttggc
gagaaaacggcccttgccttgttacaaggccttggcagcatagatgacatttatcagcgt
ttggatgagatcgctgcgcttggtttccgtggttcaaaaaccatgaagcaaaaaatgctc
gacaacaaagacatggcggaactgtcttacaccctcgccaccatcaagtgtgatgttgaa
ctgccgttcaatgccctagaattaaccaataatcaggcagacaaagaagccttgcgtgaa
tggttcaccaaactggaattcaaaacctggttaaaagacttagataaagcgcctagcgtt
gacaatccagacgacacagtgggtaatctggacggccaagccaccgccagcaaatctgac
atccaagtgcagtacgataccattttagacaaagccagcttcacaagctggtttgaagcc
attcaacaagccgatttagtggcgtttgataccgaaaccaccagcttgaattacatggcc
gccgagttagttggtgtgtctttttctattgaagccggcaaagccgcctatctgccactt
gcccacgactatgaaggcgcaccagagcaactggatcgtgattgggtactagagcagctt
aaaccttggctggaagacgaaacggcagcaaaagttggtcagcatttaaaatatgatgcc
aatgtgttgaataattatggcattcgtctaggtggcattatttacgacaccatgttggaa
tcttacgtctttaactcggtcagttctcgccatgatatgggcagcttggccgaaaagttc
ctcgaccataaatgcgtcagctttgaagacattgccggcaaaggtgcaaagcaaaagacc
ttcaaccagatcgacttagaacaagcggctttttatgcagcggaagacgcagatattaca
ctgcgcttgcatcaagccatttggccacagttagagaaaacacctgagctggtgagtatt
ttcaaagacatcgaatgtccattagtgcccgtattggccaagatggaacaaactggcgca
ctgattgaccctgaattattgcacgcgcaaagcagtgaaattgccaccaaacttcaagaa
ttggaaatcaaagcccatgaagaagccggggaaagttttaacctgagctcaccaaagcag
ctacaagtcatcttatttgaaaagctggaattgcccattatcaagaagacaccaaaaggt
cagccttccactgctgaaccgattttgcaggagctggccgaaaactacgaattgcctcgt
atcattatggaacaccgcagtttgtctaagctcaaatccacctacacagacaaactgccc
gaaatgctacaaaagacaggtcgtattcatacttcttaccatcaagcggtgaccgctact
gggcgtttgtcttctaccgatccgaacttacagaacattccgattcgtaccgccgaaggt
cgtcgcattagacaggcctttattgcaccagaaggctataaactggtggcagcagactat
tcgcaaatcgaactacgtattatggcgcacttatcacaggacaaaggcttactggacgcg
tttgccaacaacgcagatgtacacagagccaccgctgcagaagtgtttgaaagcacagct
gaagaagtcacgacggaacaacgtcgtcgtgccaaagccatcaactttggcttgatttac
ggcatgtcagcctttggtttagccaaacaacttggcatcgctcgtccagaagcgcaaaaa
tacgtacaacgctactttgaacgttatcccggcgtgcgtacctacatggataacacacgt
gaacaagccaaagaaaaaggcttcgtggaaaccatctatggtcgtcgtttgtacttgccc
gatatcaaggcgaaaaacgccatgatgcgccaagccgctgaacgcaccgccatcaacgcg
cctatgcaaggctctgctgccgacatcatcaaacgcgccatgatccaaatgcacaactgg
cttgccgacaccgacctagatgtacgtatgatcatgcaagtacatgatgaactcatcttt
gaagtggccgaaaaagacctagcggcagcgcaagaaaagattgtcgagatcatgcagaat
agcagcaagatcgacgtgcctttgcttgtggaagcaggcgtaggggataactgggacgag
gcgcattag
DBGET
integrated database retrieval system
