Marinomonas sp. THO17: THO17_22070
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Entry
THO17_22070 CDS
T10670
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
math Marinomonas sp. THO17
Pathway
math00040
Pentose and glucuronate interconversions
math01100
Metabolic pathways
math02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
math00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
THO17_22070
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THO17_22070
Enzymes [BR:
math01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
THO17_22070
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
BFM50044
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All DBs
Position
complement(2378198..2379679)
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AA seq
493 aa
AA seq
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MNRNLMVASCLAMGLIAGCSSLGVESSHNSISRQAMPADYGWASAEGPLLGGSQASEQHI
YTVTNRKEFVVALEQSGNLPSIIQIRGTINLSSDDSGRELKEEDYRVAPYQFDLYKAAYA
PSVWNIKPLIKGRPNRKLSGPQEEARQASADRQKAQIVVNIPSNTSLIGLGDDAKIIKGM
LYLGAGVENVIIRNIHFEDAFDYFPSWDPGDSFKIDTSYPGCQAKYVNANLGPQKCRGGR
WNAEYDLISINGAKRIWIDHCSFSDGDRPDYFFPAVYPFPQNEITQKVQHHDGLIDIINQ
ADLITISSSYFHDHDKAMLIGNSDKKTQDEGHLRVTLHGNYFKNVGQRMPRVRYGQVHSY
NNYFVGDASGDGQGANNYERHVDSLKDKPKHNILRQALGAGKHSAIYSEANVFEIANGTP
ANAIGHMKGDVAFDRGSMFNGQMIDIIAEANKVSGKILSKDVGWQPYLYGPAPLLPVSEV
IDYVKANAGAGKL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaatcttatggtcgcatcgtgtctcgcgatgggcttaatagctggatgttca
agcctaggtgtagagtcttcacataacagcattagtcggcaagccatgccagctgattac
ggctgggctagcgcagaaggccctttattaggtggttcacaagctagtgaacagcatatc
tatacggtaaccaatcgcaaagagtttgttgtggcattagagcaatccggtaacttacca
agcattatccaaattcgtggcaccattaatctctcttctgatgattctggacgagagctc
aaggaggaagattatcgtgttgcaccctatcagtttgacttgtataaagcagcttatgca
ccaagcgtatggaacatcaaacccttgatcaaaggacgtccaaaccgcaaattatctggc
ccgcaagaagaagccagacaagcttcagcggaccgacaaaaagcacaaattgtagtgaac
ataccttctaataccagtttgattggactgggagacgatgcaaaaattatcaaaggcatg
ctttatcttggcgctggtgtagaaaatgtcatcatccgtaatattcatttcgaagacgcg
tttgactacttcccaagttgggatccgggcgacagtttcaaaatagacaccagttacccc
ggctgtcaggcgaaatatgtgaatgccaatttagggcctcaaaaatgccgtggtggtcgt
tggaacgccgagtatgatttgatctcgataaatggggcaaaacgcatctggattgatcat
tgtagcttctctgacggcgatcgacctgattattttttcccagctgtttatccatttcct
caaaatgaaatcactcagaaagtgcagcatcatgatggcctgatcgacatcattaatcag
gcagatttgataactatatcaagcagttactttcatgatcatgataaagccatgttgatc
ggtaacagtgataaaaagacgcaagatgaaggtcatttacgagtgacactacatggtaat
tacttcaaaaatgtgggtcagcgtatgccaagagtgcgttacggacaagtacacagttac
aacaattattttgtgggagacgcctctggagatggtcagggggctaacaattatgagcgt
catgtggattccctaaaggataaacctaagcataatattttgcgccaagcattgggagca
gggaaacactctgccatttactctgaagcgaatgtttttgagattgcgaatggtacgccc
gctaatgccattggtcatatgaaaggcgatgtggcgtttgaccgagggtctatgtttaac
ggtcagatgattgacatcattgcggaagccaataaagtcagcggcaagattttatcaaaa
gacgtgggttggcagccgtatctttatggccctgcccccctgttacccgttagtgaggtc
attgattacgtcaaagccaacgcgggagcgggtaagctttag
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