Marinomonas sp. THO17: THO17_22070
Help
Entry
THO17_22070 CDS
T10670
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
math Marinomonas sp. THO17
Pathway
math00040
Pentose and glucuronate interconversions
math01100
Metabolic pathways
math02024
Quorum sensing
Brite
Enzymes [BR:
math01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
THO17_22070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFM50044
LinkDB
All DBs
Position
complement(2378198..2379679)
Genome browser
AA seq
493 aa
AA seq
DB search
MNRNLMVASCLAMGLIAGCSSLGVESSHNSISRQAMPADYGWASAEGPLLGGSQASEQHI
YTVTNRKEFVVALEQSGNLPSIIQIRGTINLSSDDSGRELKEEDYRVAPYQFDLYKAAYA
PSVWNIKPLIKGRPNRKLSGPQEEARQASADRQKAQIVVNIPSNTSLIGLGDDAKIIKGM
LYLGAGVENVIIRNIHFEDAFDYFPSWDPGDSFKIDTSYPGCQAKYVNANLGPQKCRGGR
WNAEYDLISINGAKRIWIDHCSFSDGDRPDYFFPAVYPFPQNEITQKVQHHDGLIDIINQ
ADLITISSSYFHDHDKAMLIGNSDKKTQDEGHLRVTLHGNYFKNVGQRMPRVRYGQVHSY
NNYFVGDASGDGQGANNYERHVDSLKDKPKHNILRQALGAGKHSAIYSEANVFEIANGTP
ANAIGHMKGDVAFDRGSMFNGQMIDIIAEANKVSGKILSKDVGWQPYLYGPAPLLPVSEV
IDYVKANAGAGKL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaatcttatggtcgcatcgtgtctcgcgatgggcttaatagctggatgttca
agcctaggtgtagagtcttcacataacagcattagtcggcaagccatgccagctgattac
ggctgggctagcgcagaaggccctttattaggtggttcacaagctagtgaacagcatatc
tatacggtaaccaatcgcaaagagtttgttgtggcattagagcaatccggtaacttacca
agcattatccaaattcgtggcaccattaatctctcttctgatgattctggacgagagctc
aaggaggaagattatcgtgttgcaccctatcagtttgacttgtataaagcagcttatgca
ccaagcgtatggaacatcaaacccttgatcaaaggacgtccaaaccgcaaattatctggc
ccgcaagaagaagccagacaagcttcagcggaccgacaaaaagcacaaattgtagtgaac
ataccttctaataccagtttgattggactgggagacgatgcaaaaattatcaaaggcatg
ctttatcttggcgctggtgtagaaaatgtcatcatccgtaatattcatttcgaagacgcg
tttgactacttcccaagttgggatccgggcgacagtttcaaaatagacaccagttacccc
ggctgtcaggcgaaatatgtgaatgccaatttagggcctcaaaaatgccgtggtggtcgt
tggaacgccgagtatgatttgatctcgataaatggggcaaaacgcatctggattgatcat
tgtagcttctctgacggcgatcgacctgattattttttcccagctgtttatccatttcct
caaaatgaaatcactcagaaagtgcagcatcatgatggcctgatcgacatcattaatcag
gcagatttgataactatatcaagcagttactttcatgatcatgataaagccatgttgatc
ggtaacagtgataaaaagacgcaagatgaaggtcatttacgagtgacactacatggtaat
tacttcaaaaatgtgggtcagcgtatgccaagagtgcgttacggacaagtacacagttac
aacaattattttgtgggagacgcctctggagatggtcagggggctaacaattatgagcgt
catgtggattccctaaaggataaacctaagcataatattttgcgccaagcattgggagca
gggaaacactctgccatttactctgaagcgaatgtttttgagattgcgaatggtacgccc
gctaatgccattggtcatatgaaaggcgatgtggcgtttgaccgagggtctatgtttaac
ggtcagatgattgacatcattgcggaagccaataaagtcagcggcaagattttatcaaaa
gacgtgggttggcagccgtatctttatggccctgcccccctgttacccgttagtgaggtc
attgattacgtcaaagccaacgcgggagcgggtaagctttag
DBGET
integrated database retrieval system
