Marinomonas sp. THO17: THO17_23200
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Entry
THO17_23200 CDS
T10670
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
math Marinomonas sp. THO17
Pathway
math03420
Nucleotide excision repair
math03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THO17_23200 (uvrD)
03430 Mismatch repair
THO17_23200 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_23200 (uvrD)
Enzymes [BR:
math01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THO17_23200 (uvrD)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THO17_23200 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
THO17_23200 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BFM50157
LinkDB
All DBs
Position
2500410..2502623
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AA seq
737 aa
AA seq
DB search
MDVSFILDSLNDKQREAVAAPLQNSLVLAGAGSGKTRVLVHRIAWLMHAYELSPYSLMAV
TFTNKAAREMQGRIEELVGVPPQGMWVGTFHGLAHRLLRAHWRDAGLKENFQIMDSDDQL
RLIKRIMRELSIDDTRWPPKQVAWFINAQKDEGCRAAHVPDSHDPFMKGMRELYYHYEEA
CERGGLLDFGELLLRAHELMLSTPALLRHYQERFRHVLVDEFQDTNSIQYAWLRVMVGDQ
GTITAVGDDDQSIYGWRGAKIENIHNFSKHFTDVHTIRLEQNYRSTGHILNAANGLIQNN
DDRLGKELWTDSGEGEPISIYAGFNEQDEARFILGVIKEWRDKGTSLTDMAILYRSNAQS
RVIEECLVREQIAYRIYGGHRFYDRLEIKNALAYARLALDPNDDGAMERVVNVPPRGIGE
RSIGTLREIARDQGCSMWQAAQEVVRQSLMPARATNAIKTFLHLVEGLITTVQQLDLNLN
DIFEQIIDEAGLIPFHEKEKGEKGEARIENLKELIGAAGGFSWNDEDEEFSSPLMAFLDQ
AVLDAGDAQADEYQDAVQLMTLHSAKGLEFPLVFLTGVEENIFPSKMSFEEPGRLEEERR
LCYVGITRAMEKLYITYAESRRLFGSESFNSPSRFIKEIPQECLQEVRLRSQISRPVSLQ
RPDFQAEKAKLQNSSVLNRYQAPEVNVSMGDKVKHPVFGEGLVVNYEGQGPQARVQVNFD
DEGTKWLVLSFAKLEVL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttttattcttgattctctaaatgataaacagcgcgaagcggtagcggcg
ccactacaaaacagcttggtattagctggtgcaggatcagggaaaacccgcgtattagta
catcgtattgcttggttgatgcacgcttatgaactgtcaccatacagcttgatggcagtg
acttttaccaataaagcggctcgtgagatgcaagggcgtattgaagaactggttggggtg
ccaccacaaggtatgtgggtcggcacctttcacggtttagcgcatcgcttgttgcgtgcc
cattggcgtgacgcgggcttaaaagaaaattttcagatcatggattctgacgatcaactg
cgtttaatcaaacgtattatgcgtgagctgagcatagatgatactcgttggccacctaag
caagtggcctggtttattaatgcgcaaaaagacgaaggttgccgagctgcgcatgtgcca
gacagtcatgatccttttatgaagggcatgcgagaactctactatcactatgaagaagct
tgtgagcgtggtggcttattggattttggcgagttgctgctgcgtgctcatgaactcatg
ctgagcacgccggcattattgcgtcattaccaagagcgttttcgtcatgtgctggtggac
gaatttcaagataccaatagtattcaatatgcttggttaagagttatggtgggggatcaa
ggcaccatcaccgcagtgggcgatgacgatcagtccatttatgggtggcgtggtgcaaaa
attgaaaacattcacaatttcagtaaacactttaccgatgttcatactattcgtttggag
caaaattaccgttctacaggacatattttgaatgccgctaatggcttgattcaaaacaat
gatgatcgtttaggcaaagagctgtggactgacagtggtgaaggcgagccgatttccatt
tatgcaggttttaacgaacaggatgaagcacgttttatactgggagttattaaagaatgg
cgtgacaaaggcacttccctgacagatatggccattttatatcgttccaatgcccagtca
cgtgtcatagaggaatgcttggttagggaacagattgcttatcgtatatatggtggacac
agattctacgatcgcttggaaatcaaaaatgccttagcctatgcgcgattagccttggat
cctaacgatgatggtgccatggaaagggtggttaatgtgccaccacgtggtattggtgaa
cgcagtattggtaccttacgcgagatagcacgagatcaaggctgctctatgtggcaggcg
gcacaagaggtggtacgacaatctttgatgccagcgcgtgcgaccaatgccatcaaaact
ttcttacacttggtagaaggtttgattaccacggttcagcagctggacttgaatcttaat
gacatttttgaacagattatcgacgaagccggtttgattcctttccatgaaaaagaaaag
ggtgaaaaaggcgaagcgcgtattgaaaacttgaaagagttaattggcgcggcgggtggc
ttcagttggaacgacgaagacgaggaatttagctcacctttgatggcctttttggatcaa
gcggttttggatgcgggtgatgcgcaagcggatgaatatcaagatgcggtgcagttgatg
accttgcactccgcaaaaggcttggaatttcctttggtgtttctgactggggtggaagaa
aatatttttccgagcaaaatgtcctttgaagagccagggcgcttagaggaagaacgtcgt
ttgtgttatgtgggcatcacccgtgccatggagaaactgtacatcacctacgctgaatcc
cgtcgattgttcggtagtgaatcctttaacagtccatcgcgctttatcaaagaaattccc
caagaatgtttacaggaagtacgcttgcgctcgcagatcagccgccctgtgtcattacag
cgtcccgattttcaagctgaaaaagctaagctgcaaaacagcagtgtgttaaatcgctat
caagcacctgaagtaaacgtcagcatgggggataaggtaaagcatccggtatttggcgag
ggcctagtggtgaactacgagggacaagggccacaagcgcgggttcaggttaactttgat
gacgaaggcactaagtggttggtgttgtcttttgctaagctggaagtgctgtaa
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integrated database retrieval system
