Marinomonas sp. THO17: THO17_23940
Help
Entry
THO17_23940 CDS
T10670
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
math Marinomonas sp. THO17
Pathway
math03030
DNA replication
math03430
Mismatch repair
math03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THO17_23940
03430 Mismatch repair
THO17_23940
03440 Homologous recombination
THO17_23940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
math03032
]
THO17_23940
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_23940
Enzymes [BR:
math01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THO17_23940
DNA replication proteins [BR:
math03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THO17_23940
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THO17_23940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BFM50231
LinkDB
All DBs
Position
complement(2583972..2584682)
Genome browser
AA seq
236 aa
AA seq
DB search
MAMHISNQHSEPLDWPNLFKKWAKEAPEGALKRYYQAGMIAANTPLKDVPLLALDLETTG
LDPNNDEIISLGLIPMKHNAIRCQGAGYWMAKPKKALHAESVTIHEITHSELTDAPQLDH
ILDDILDVMSKQVLVVHCVAIERQFLLEASLKHYGYPLYFPVLDTMDIERQAQHKPWWRQ
FGKAPSLRLDACRQRYHLPRYKAHHALTDAISSAELLQAQIAHHMDLAAPISRYWL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcatatttccaaccaacacagcgagcctcttgattggccaaatctctttaaa
aagtgggcaaaagaagcgccagaaggggcattaaaacgctattatcaagcagggatgatt
gcggctaatacaccattaaaagacgtgcccttactggccttagaccttgaaaccactggc
ttagatccgaataacgacgagatcatcagcttgggcttgatccccatgaaacacaatgcc
attcgttgtcagggagcaggttactggatggcaaagccaaaaaaagctttgcatgccgaa
tcggtcaccattcacgaaatcactcattctgagcttaccgatgcaccgcaattggatcac
attttggacgacatcttggatgtcatgtcaaaacaagtcctggtagtacattgcgtggcg
attgaaaggcagttccttctagaggcctccttgaaacactatggttaccctttgtatttt
cctgttttggacaccatggacatagagcggcaagcacaacacaaaccttggtggagacag
tttggtaaagcgccgtcattgcgtttagatgcttgtcgacagcgctaccatttgccgaga
tacaaggcccatcacgcattgacagatgccatatcatcggcggaattgttacaagctcaa
atagctcatcacatggaccttgcagccccaattagtcgctactggctgtag
DBGET
integrated database retrieval system
