Marinomonas sp. THO17: THO17_24090
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Entry
THO17_24090 CDS
T10670
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
math03021
]
THO17_24090 (rpoH)
Transcription machinery [BR:
math03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
THO17_24090 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
BFM50246
LinkDB
All DBs
Position
2600463..2601329
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AA seq
288 aa
AA seq
DB search
MGKALQPIDMMTPGQNLESYVQTVSRIPILTADEEKALAERLYYQEDLEAARTLVMSHLR
FVVHIAKSYSGYGLAQGDLIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFILK
NWRIVKVATTKAQRKMFFNLRSAKKSLSWFSNSEVESVANDLGVTPDVVRQMEGRLSASD
MAFDASADDDDDSAFQAPSQFLEDHRSDPALLLENGNWEEDSNQRLELAMADLDERSRNI
LVQRWLSDGKSTLHELADEYGVSAERIRQLEKNAMKKIRLAMGDGQFD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttcagcctatagatatgatgactccaggtcagaaccttgagtcgtat
gtgcaaacagtaagtcgtattccgattttaactgctgatgaagaaaaagccttagcagaa
cgtctttattatcaagaagacttggaagcggcgcgtacactcgtcatgtcacatttgaga
tttgttgtgcacattgcaaaaagttattcaggttatggcttggctcaaggtgatttgatc
caagaaggtaacgttggtttgatgaaagccgtaaaacgttttaatcctgaagtgggtgtg
cgtttggtttctttcgcggtgcattggatcaaagctgaaattcatgaatttattctgaaa
aactggcgtattgtgaaagtggcaaccactaaagcgcagcgcaaaatgttctttaacttg
cgtagtgcgaaaaagagtttgtcatggtttagtaattctgaggtcgagtcggtggctaat
gatcttggtgtgacgccagacgtggttcgtcaaatggaagggcgtctaagcgcttcagat
atggcgtttgatgcgtctgctgacgatgacgatgacagtgcgtttcaggctccgtcgcag
tttttagaggatcatcgctctgatccggcgttattgttggaaaacggcaattgggaagaa
gattctaatcaacgtcttgaactcgctatggccgatttggacgaacgtagtcgtaatatt
ctggtgcaacgttggttgtcggatggtaagtctactttacatgaattagccgatgaatat
ggagtttctgctgaacgtattcgtcagcttgaaaagaacgccatgaagaaaattcgtttg
gcgatgggtgatggtcagtttgactga
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