Marinomonas sp. THO17: THO17_24730
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Entry
THO17_24730 CDS
T10670
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
math Marinomonas sp. THO17
Pathway
math03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
THO17_24730 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
math03021
]
THO17_24730 (rpoA)
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_24730 (rpoA)
Enzymes [BR:
math01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
THO17_24730 (rpoA)
Transcription machinery [BR:
math03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
THO17_24730 (rpoA)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
THO17_24730 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BFM50310
LinkDB
All DBs
Position
2669741..2670745
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVSELLTPRNIEVQELGNTRAKVTLQPLERGFGHTLGNALRRILLSSMPGCAIVEVE
IDGVLHEYSAIEGVKEDVIEILLNLKGVAIALHGQDEATLTLSKKGPGVVTAGDIQLVAD
AEIANPDHVIAHLDDTAELTMQIKVARGRGYEPADARVAGDDETRPIGRLQLDASFSPVR
RVAYSVDNARVEQRTDLDKLVLDIESNGTIDPEEAIRRAATILQQQIAVFVALESESEAP
VEEEEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLAQRGLSLGMRLENWPPASLKDDSKVLAR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgagcgaattgttaaccccacgaaacattgaagttcaggaattaggc
aacacgcgcgctaaagttacgctacaaccgctagaacgtggttttggtcatactttgggt
aatgcgctacgtcgcattcttttatcttcgatgccaggttgtgcgattgttgaagtcgaa
atcgacggtgtattacacgaatacagcgcaatcgaaggggttaaagaagatgtaattgaa
attcttcttaacctgaaaggagttgcgatcgctctacacgggcaagatgaagcaactctt
actctaagtaaaaaaggtcctggtgtcgtaacggctggtgatatccagttggttgctgac
gcagagatcgctaacccagaccatgttattgcgcacttggatgatactgcagagttaact
atgcagataaaagtcgctcgtggtcgcggttatgagcctgctgatgctcgtgttgctggc
gacgatgagactcgtccaattggtcgcttgcaactggatgcctcattcagccctgttcgt
cgtgttgcttacagtgtcgataatgctcgtgtagagcaacgtacagacttggataaattg
gtgctagacatcgaatccaacggtacgatcgatcctgaagaagctatccgtcgtgcagcg
accattcttcaacaacaaatcgctgtatttgttgccctagaaagcgaaagcgaagcgcct
gttgaagaagaagaggatgagattgatccaatattgctacgcccggttgatgatcttgaa
ttgaccgttcgcagtgctaactgtttgaaagcagagaacatttattacatcggtgatttg
attcaacgtactgaggttgagcttcttaagacgcctaacctaggtaagaagtcgttaact
gaaatcaaagatgttttagcacagcgtggtttgtctttgggaatgcgtctagaaaactgg
ccaccagctagtttgaaagacgatagcaaagttctagctcgctag
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