Marinomonas sp. THO17: THO17_25320
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Entry
THO17_25320 CDS
T10670
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
math Marinomonas sp. THO17
Pathway
math03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THO17_25320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_25320
Enzymes [BR:
math01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THO17_25320
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THO17_25320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
PriA-like_WH
Zn_ribbon_6
AAA_22
nSTAND3
AAA_19
AAA_11
MeaB
SLFN-g3_helicase
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
BFM50369
LinkDB
All DBs
Position
complement(2742490..2744721)
Genome browser
AA seq
743 aa
AA seq
DB search
MQEQLLTQSPYIKVALPVPLRTLFDYKVPKAIALRHDLKPGMRVKVPFGKSSRIGVIVAL
SQQTEWNPDEVKPLTSLHDKAPVLTDELMSLCLWAARYYHHPIGDVLFHALPVLLRKGEN
AEFRTENWWFTTDLGRTYDLTQLNRAPRQQDFLKAVQQHPNGLSQQATAVLDLAHAAGKT
LEEKGLVRREPRAFNKAGEKHTHQTQVPPTLNPEQSQAIERLQQHSHQFHVALLDGVTGS
GKTEVFLRLIEEYVNKGQQVLVMVPEIGLTPQTLKRFEVRFNTDIVLMHSNMNDRERLDA
WLLAANGHAKIIIGTRSAVFVPAPHLSLIVIDEEHDASYKQHEKFRYHARDLAIKRAQSR
NIPVLLASATPSYESLANALQQRFSWLKLRHRAGDAKPPIMERVDLRGQQLVHGFSETAL
VNIKQTLARKEQVLIFLNRRGYAPTLMCHQCGWIATCDHCDVNLTVHKGANKLHCHHCDA
QKALIHQCPDCHSDELFTVGEGTEQLETQLSSLFKDTPVLRIDRDSTQGKTAMTKLTQKI
HEHDQAILIGTQMLAKGHHFPNVTLVIIMDADAGLFSSDFRGMERTAQLITQVAGRAGRA
KKPGHVLLQTYHPDHAAIECLCHSGYEQFAIEGLAERKSLSLPPFYHQVIVRAESANEQE
AMQFFHAMKIDLAPILPKDVYWVGPYAAIIVRKAGQHRALISLKSAQRAPLHQATQVITH
WLEQATKQHKMRFAIDVDPLETY
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagcaactactaacccagtctccctacattaaagtggctctgcctgtgccattg
cgcactctgttcgattataaagttcccaaagccatcgccctgcgtcacgacttaaaacct
ggaatgcgcgtcaaagtgccctttggtaaaagcagccgtatcggtgtcatagtagcatta
agccagcagaccgaatggaaccctgatgaggttaagccgcttacttcattacatgacaaa
gcacccgttctgacagatgaacttatgtcactgtgtttgtgggccgctcgctactatcac
caccccattggcgatgtgctttttcacgctttacccgtattactgcgcaaaggagagaat
gcggaatttcgcactgaaaattggtggttcactaccgatttaggacgtacctatgacctt
acccaacttaatcgcgctccacggcaacaagactttctcaaagcagtacaacaacatcca
aatggtttaagtcaacaagcaaccgcggtattggatttggctcatgcggcaggcaaaaca
ctagaagaaaaaggtctagtgagaagagaaccccgcgcctttaacaaagcaggagaaaaa
cacactcatcaaacacaagtacctcctactctcaatcctgaacaaagccaagccattgaa
aggctacaacaacacagccatcaatttcatgttgctttgctggatggcgtaacaggtagc
ggtaaaacagaagtctttttgcgtttaatagaagagtacgtcaataagggtcaacaagtg
ctggtgatggtgcctgaaattggtcttacaccacaaaccttaaagcgttttgaagtgcgt
tttaatactgacattgtattaatgcattccaacatgaacgacagagagcgcttagacgct
tggttattggctgccaatggccacgctaaaatcatcattggcacacgttcagcagtattt
gtcccagccccccatttgagtttaatcgtcattgacgaagaacatgatgcatcctataag
caacacgaaaaattccgttatcacgctcgggatttagcgataaaacgcgctcagtccaga
aacattcctgtgttattggcttccgcaacaccttcatacgaaagtcttgctaacgctttg
caacaacgtttttcttggctcaaactgcgccatagagccggtgatgcgaaaccacccatt
atggaacgagtcgatctacgtggacaacaattagtccacggttttagtgaaaccgctttg
gtaaatatcaagcaaactttggccagaaaagaacaggtgctgatatttctcaatcgtcgt
ggttacgcacctactctcatgtgtcatcaatgtggttggattgctacttgcgatcattgt
gatgtcaatctgacggtacacaaaggtgccaataagttgcactgccatcattgtgacgca
caaaaagccttgatacatcaatgtcccgattgccatagcgatgagctgttcaccgttggc
gaaggcaccgagcagctagagacccagttaagcagcttgtttaaagacacccccgtgtta
cgcattgatcgcgacagtacgcaaggcaagacggcgatgactaaactaacgcaaaaaatc
catgaacatgatcaagccatcttaattggcactcaaatgctggccaaaggccaccatttc
cccaatgtcaccttggtgattattatggacgccgatgcgggattattttcgtcggatttt
cgtgggatggagcgcacggctcaacttatcacccaagtggccggacgtgccgggcgggcg
aaaaagcccggccatgtactgttacaaacttatcatccagaccatgccgccatcgaatgt
ttatgtcattctggctacgaacaattcgccattgaaggattagccgagcggaaatctttg
tctttaccgcccttttatcatcaagtcatagtgcgagcagagtcggcaaatgagcaagaa
gccatgcagttttttcatgccatgaaaatcgatttagcccccattttacccaaggatgtt
tattgggttggaccttatgctgctatcattgtacgcaaggctgggcagcatcgcgctttg
atatccttaaagtccgctcagcgtgcacctctacaccaagcaacacaagtcattactcac
tggttggaacaggcgacaaaacagcataaaatgcgtttcgcaatcgacgttgatccactg
gaaacttactag
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