Marinomonas sp. THO17: THO17_27970
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Entry
THO17_27970 CDS
T10670
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
math Marinomonas sp. THO17
Pathway
math03030
DNA replication
math03430
Mismatch repair
math03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THO17_27970
03430 Mismatch repair
THO17_27970
03440 Homologous recombination
THO17_27970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
math03032
]
THO17_27970
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_27970
Enzymes [BR:
math01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THO17_27970
DNA replication proteins [BR:
math03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THO17_27970
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THO17_27970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BFM50634
LinkDB
All DBs
Position
3015549..3016211
Genome browser
AA seq
220 aa
AA seq
DB search
MWCRILEVFKHWRQQRYSIRRTWSDWEYLVLDIETSGLDPKQDHIVSIGWVCIKQGAIDL
DSARHLILEEAQAGENVGIHMITDSDIQQYGKKQESALRYLRHFLRGRVLVMHHAPLEIG
FLKAAWKQHVLPNFGLIWLDTLMLEKAKAERAQQPIQEGGFRLNQCRERYHLPDYQGHDA
LTDALATAELLLAQIAYQGKGCRLYDLSVMAGGKSRLAPR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtggtgccgcatactagaagtgttcaaacattggcgacaacaacgatactccattcgc
cgaacttggtctgattgggagtatttggtattggatatcgagacttctggcctagatcct
aagcaagatcatattgtgagtatcggatgggtgtgcataaaacaaggtgcaatagatcta
gacagtgcgcgccatcttattctggaagaagcacaagctggagaaaatgtaggcattcac
atgatcacggattcagacattcagcaatacggtaaaaaacaagaaagtgcgttacgttat
ttgcggcactttttacgagggcgggtgttggtcatgcatcatgcgccattggaaatcggt
tttttgaaagccgcttggaaacaacatgtattacccaactttggcctcatttggttggat
actttaatgttggaaaaagccaaggcggagcgtgcccaacaaccgattcaggaaggcggt
tttcggttgaatcagtgccgagaacgttatcatcttcctgattatcaaggacatgatgcc
cttaccgatgcgctcgctactgctgaattgttgttggcgcaaattgcctatcaggggaaa
ggttgtcgcttatacgatttgagtgtcatggcgggtggtaagagccggctggcaccacgt
tga
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