Marinomonas sp. THO17: THO17_29660
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Entry
THO17_29660 CDS
T10670
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
math Marinomonas sp. THO17
Brite
KEGG Orthology (KO) [BR:
math00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
math03016
]
THO17_29660 (truB)
Enzymes [BR:
math01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THO17_29660 (truB)
Transfer RNA biogenesis [BR:
math03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THO17_29660 (truB)
Prokaryotic type
THO17_29660 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF6360
Motif
Other DBs
NCBI-ProteinID:
BFM50803
LinkDB
All DBs
Position
3219907..3220836
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AA seq
309 aa
AA seq
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MSKTKWRSVDGIVLLNKPLGLSSNQALQKVRRLYRAAKAGHTGALDPLASGMLPLCLGEA
TKFSQFLLDADKRYITCLKLGKRTTTGDMEGEILSDEAVPQLSDAEFEVILDRFRGEIEQ
IPPMYSALKHQGKPLYEYARKGIVIERKRRQVTISNLTLVSRTEDTLTLDVQCSKGTYIR
TIGEDIGEALGCGAHLQSLHRVSTAGYDSQDMMTLEEFMTLAEAGEVQLDAKLMSMDTAV
AHLDQVELSALEAREMVFGRQVENHTNLAKGSLVRLYNQAEHRFLGLGMIKDRFIKPHRL
INTSELANK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaccaaatggcgttcagtagacggtattgtgctactgaacaagccactcggc
ctaagttctaatcaagccttgcaaaaggttcgtcgtttgtatcgagcggcaaaagctggt
catacaggtgcgcttgatcctttagcgagcggtatgctaccgctttgtctgggcgaagcc
accaaattttcgcaattcctgctagacgctgataagcgttatatcacctgtttgaagttg
ggcaaacgtaccacgacaggggatatggagggcgagattttgagtgatgaagccgttcca
cagttgtctgacgcagagtttgaagtcattcttgatcgttttcgtggcgaaattgaacaa
attccccctatgtattcagccttgaaacaccaaggtaaacctttgtatgaatacgctcga
aaaggcattgtgattgagcgtaaacgtcgtcaagtgactatatccaaccttaccttggtg
tcacgaacggaagataccttgacactggatgtgcagtgctcaaaaggaacctatattcgc
actataggggaagacattggtgaggctttgggttgtggtgcgcatttgcaatctctgcat
cgtgtgtcaacggcgggttatgattcgcaagacatgatgacgttggaagaatttatgacc
ttggctgaagccggtgaagtacaattagatgcaaaattaatgtctatggatactgccgtt
gcacatctagatcaggtagaattgtcagcgctcgaagcaagggaaatggtgtttggtcgt
caggttgaaaatcataccaatttggcgaaaggcagcttggtgagattatataatcaagcg
gaacatcgttttttaggccttggcatgataaaagatcgttttattaagccacatcgactt
ataaataccagtgagttagccaacaaatag
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