Marinomonas sp. THO17: THO17_29680
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Entry
THO17_29680 CDS
T10670
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
math Marinomonas sp. THO17
Pathway
math03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THO17_29680 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
math03019
]
THO17_29680 (pnp)
03016 Transfer RNA biogenesis [BR:
math03016
]
THO17_29680 (pnp)
Enzymes [BR:
math01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
THO17_29680 (pnp)
Messenger RNA biogenesis [BR:
math03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
THO17_29680 (pnp)
Transfer RNA biogenesis [BR:
math03016
]
Prokaryotic type
tRNA degradation factors
THO17_29680 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
BFM50805
LinkDB
All DBs
Position
3221371..3223479
Genome browser
AA seq
702 aa
AA seq
DB search
MSITTKTFQYGNQEVTLETGRIARQATGAVLCTVGDAQVLATVVGAKSANPGQDFFPLSV
HYQERTYAVGKIPGGFLKREGRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVVCTVMSTN
TDLDADIPAMLATSAALAVSGIPFNGPIGAARVGFTDESGYLLNPTNSELTESLLDMVVA
GTKDAVLMVESEAQELTEDEMLGAVLFAHKEMQAAVNAINEFAAEAGKPRWDWAPEATNE
ELKTAVQSGFAAQIEEAYTISDKMDRYAKLGEVREAAIAALVTEEGPYSEADVAATFGKL
EKNIVRRRVIDGKPRIDGRDNKTVRPIAVEVGMLKKTHGSALFTRGETQAIATCTLGTSR
DAQIADGLAGESKDSFMLHYNFPPYSVGECGRMGGVGRREIGHGRLARRGVQAVLPTEEE
FPYTIRVVSEITESNGSSSMASVCGASLSMMDAGVPLKAPVAGIAMGLVKEDDGFAVLTD
ILGDEDHLGDMDFKVAGTEEGITALQMDIKIEGINEEIMDIALSQALEARTHILREMAKT
IGYARPEVSPNAPSMATIKIDPEKIRDVIGKGGATIRSITEQTGASIDLDDDGTVRIYAA
DKASSDAALLKIHEITAEAEVDKLYKGKVVRLAEFGAFVNILPGKDGLVHISQIAEERIR
AVTDFLAEDQEVIVKVLDVDARGRIKLSMKDVTEEEKAAFAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattacaacaaaaaccttccaatacggaaaccaagaagtgaccttagaaacaggt
cgcatcgcacgtcaagcgacaggtgctgtgctatgtactgtgggggatgcgcaagtgctt
gcaactgtggttggtgcaaagagcgctaatcctggtcaagattttttcccattatcagta
cactaccaagagcgtacctatgcggtaggtaaaattccaggtggtttcttgaagcgtgaa
ggtcgtccttccgaaaaagaaaccctcacgtctcgtttgatcgaccgtccaattcgtcca
ttgtttccaaaaggtttcatgaacgaagtacaagttgtttgtaccgttatgtcgactaat
actgatttagacgcggacattccagcaatgcttgcaacctctgcagcgcttgctgtgtct
ggcatcccatttaatggcccaattggtgctgcccgtgttggctttactgatgagtctggt
tacctactgaacccaactaactccgagttgacagaatcactactagacatggtggttgct
ggtacaaaagacgcggtattgatggttgagtctgaggcacaagagctgacagaagacgaa
atgttgggtgcggttttgttcgcacacaaagaaatgcaagcagcagttaatgccattaac
gaatttgccgctgaagctggcaagccacgttgggactgggcaccagaagccactaacgaa
gagctaaaaacggccgttcagtctggtttcgctgcacaaatcgaagaagcttacaccatt
agtgataaaatggatcgttacgctaagttgggtgaagttcgtgaagcggccattgctgct
ttagtgacagaagaaggcccatactctgaagccgacgtggctgcgacctttggtaagctt
gagaaaaacatagtgcgtcgtcgtgttatcgatggcaaaccgcgtatcgatggtcgtgac
aacaaaaccgttcgtccgattgctgttgaagtgggtatgctgaagaaaactcacggttct
gctttgtttactcgtggtgaaacgcaagccattgcaacttgtactttgggtactagccgt
gatgcgcaaattgctgacggtcttgctggtgagtcaaaagacagcttcatgttgcattac
aacttccctccatactctgttggtgagtgtggtcgtatgggaggggttggtcgtcgtgaa
attggtcacggtcgtctggcgcgtcgtggcgttcaagcggttctgcctaccgaagaagaa
tttccatacactattcgtgtggtatctgagatcactgaatctaatggttccagttctatg
gcatcggtatgtggtgcgtctctatctatgatggacgctggtgtgcctcttaaagctccg
gttgctggtatcgccatgggtctggttaaagaagacgatggctttgcagtcctaactgac
attctaggtgatgaagaccatctaggtgacatggactttaaagtagcaggtaccgaagaa
ggtattaccgctttgcaaatggacattaagatcgaaggtatcaatgaggaaatcatggac
atcgccttgagtcaggcgttggaagctcgtactcatatccttcgtgaaatggcgaaaact
attggttacgctcgtccagaagtgtctccaaatgcgccttctatggcgaccattaagatt
gatccagagaaaatccgtgatgtgattggtaaaggcggtgcaactatccgttctattact
gagcaaacaggtgcttctatcgatcttgatgatgacggtaccgtccgtatctacgctgca
gataaagcgtcttctgatgccgcattgctgaagattcatgaaatcacagcagaagcagag
gtagacaaactttataaaggtaaagttgtgcgtttggcggaatttggtgccttcgtaaac
atcttgcctggtaaagatggtttggttcacatctcacaaattgctgaagagcgtattcgt
gcggtaacggatttcctagcggaagatcaagaagtgattgtcaaagtattggatgtggat
gcgcgtggtcgtatcaagctgtccatgaaagacgtaaccgaagaagaaaaagccgcgttt
gctgagtaa
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