Marinomonas sp. THO17: THO17_32750
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Entry
THO17_32750 CDS
T10670
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
math Marinomonas sp. THO17
Pathway
math03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THO17_32750 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_32750 (recC)
Enzymes [BR:
math01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
THO17_32750 (recC)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THO17_32750 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
FRB_dom
MIT
Phage_tail_APC
Motif
Other DBs
NCBI-ProteinID:
BFM51112
LinkDB
All DBs
Position
3565329..3568703
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AA seq
1124 aa
AA seq
DB search
MFRLYTGNRLEDLAVLLAKILAVSPPQNPFDDEHILVQNPGMAQWLKMQLAQSQSIAAGL
AFPLPSTFVWQTFKQALSDIPQQSEFNKPFLVWRLMRILDSRLQDDEFAPLQWYLSEDDS
QIRRFQLCSSIADIYDQYLVYRPDWIAAWEANKVEDAKLASLFAEQAWQAILWRDLVADI
SEQGESLYHRGNLIDALQDACTTKARPSGVPERIFIFGVSSLPPNTLESLRVLAESGWLE
VHLFLQNPCRFYWGDVVDKHYLGREIKRQNLKPGLTLEALHLDANPLLASWGRLGRDYIA
QLQDIADDQIEVFEDYLDGDASHSTRLLHWVQQDVLNLDNHGGHQETERNLTNSRYRHGI
ADQDESVRVQVCHSPLREVEVLHDQLLDMFECYPELTPKDVIVMLPDVNAYSPFVKAVFG
QAQGNKHIPFALIDQAGGVENPIVDAYLYLLGLGESRFTLSELISVLEVPAVMQRFDLTT
QELERIRQWSVEVGIRWGLDEHTAEQHNLPKQQAHTWLNGMRRILLGYAMGHDQIWQDTL
SYGDVEGLEAAIAGKLAEFLDAIHHAQASLQQAMTPAQWLHTLYALRDTFFALEEEDSFQ
TLLANQLDALMSEWQHAHFDQALEQMVIRQLLAPRLQESQGGQGFLAGRVNFCTLMPMRS
VPFKVICVLGLNEGEYPRSVAPMGFDLMVGEYRSGDRSRREDDKYLFLEALMSAREVFYM
SYVGRSIQDNSEKNPSILLSELLEYLAQSCVFESHQDLSPEEAQQAFLQQLKVEHPLQPF
NPAYYDESWGKAVKKRGLYSFNPDWLPALQVEVENQASSITALPAFEQTSGELPLEELVR
FVSHPARYFTQRRLKGYLNLQAEQELEDEPFSLEGLSAYQLKDELLQAMLKGEEERFLAR
LALSGVVPYGAFGQLSLQQSQQQCHQLYQFLQGYALEALAPVEVNLDLAGVKVQAWLDLH
NATTRLSYRIGDMTANQKMRCWIEHLALCAQGTPKQHHLINLLKTGKVLQHEFTILPPEA
ARTYLADLLNLLHTGLCEPLVMPAKSADAWCKSYCAEKSQEDEEQAWQQAVKVYQEASNA
FTSSEVEDAYWQRYYPDIRAHQTAFVAFCEQIWLPMTRHLEPIQ
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggctttacactggcaatcgactggaagatttagcagtattgctggcaaaaatt
cttgcggtttcgccaccgcaaaatccttttgatgacgaacatattctggtgcaaaaccca
ggtatggcgcagtggctgaaaatgcaattggcccagtcccaatcgattgcggcgggcttg
gcgtttcctctaccttccacttttgtttggcagacttttaaacaggccttgtctgatatt
ccacagcaaagtgaatttaataaacccttcttagtctggcgtttgatgcgcattttggat
tcgcgtttgcaagatgatgaatttgcgccactgcaatggtatctgagtgaagacgacagc
cagattcgacgcttccaattgtgctctagcattgccgatatttacgaccaatatttggtt
tatcgccccgattggattgcggcttgggaagccaacaaggtggaggatgcaaagttagca
agcttgtttgcggagcaagcctggcaagccattttgtggcgtgatttggtggccgacatc
agtgagcagggcgagtccttgtaccacagggggaatttgattgacgctttgcaagacgct
tgtaccaccaaggctagacccagcggcgtgccggaacgcatttttattttcggtgtgtcc
tctttgcctcctaatacattggaatccttacgagtattagccgaatccggttggcttgag
gtgcatctcttcttacaaaacccctgtcgtttttattggggcgatgtagtggataagcat
tatctggggcgcgagattaagcggcaaaatcttaaacctggtttgacgcttgaagcactg
catttggatgccaacccattacttgccagttgggggcgcttggggcgagattacattgcc
cagttacaagacattgctgacgaccaaatagaagtgtttgaagattatcttgacggtgac
gccagccattcaactcgcttgctgcactgggttcagcaagatgtactgaatctggacaat
catggcgggcaccaagaaaccgaacggaacctaaccaacagccgctatcgtcatggtatt
gctgatcaggatgaaagcgtccgcgtgcaagtgtgtcatagtccattgcgagaagtggag
gtcttacacgatcagttgttggacatgtttgagtgttatcctgagctgacaccgaaagac
gtgattgtcatgttgcccgatgtgaatgcctacagtccctttgtcaaagccgtgtttggt
caagcgcagggcaataaacacattccctttgccttaattgaccaagcgggaggggtggaa
aatcccattgtcgatgcctatttgtatctgctgggcttgggagaaagccgatttacttta
tctgaactgattagtgtgttggaagtgcctgcggtcatgcagcgatttgatttgacgaca
caagaattggagcgcattcgtcaatggtcggtagaagtcggcattcgctggggcttggat
gaacacaccgccgagcaacacaatttgcccaaacagcaggcgcacacttggctcaatggt
atgcgtcgaatcttgctaggttatgccatggggcacgatcagatctggcaagataccttg
agttatggggatgttgaaggtttagaagccgcgattgccggtaaattggcggagttttta
gacgccattcatcatgcccaagcgtcgttacaacaggccatgacaccagcacaatggctg
cacaccttgtatgcactgcgcgacactttttttgccctagaagaagaggacagtttccaa
actttgttagcaaatcagttggatgccttgatgtcggagtggcaacatgcgcattttgat
caagcgttagagcaaatggtgattcgccaattattggcgccgcgtttgcaggagtcacaa
ggtgggcaaggctttctggccgggcgagtcaatttctgtaccctgatgccaatgcgctct
gtgccctttaaagtcatctgtgtattgggactcaacgaaggggaataccctcgcagtgtt
gcgccaatgggctttgatctcatggtgggagagtatcgcagtggcgatcgtagtcgacga
gaagacgacaaataccttttcctcgaagccttgatgtcggcgcgagaggtgttttacatg
agctatgtaggacgcagtattcaggataatagcgagaaaaatccgtctatcttgcttagt
gaattactggaatacttggcgcaaagttgtgtttttgaatctcatcaagacttgtcccca
gaagaggcgcagcaggcatttttacagcagttgaaggtcgaacatccgttgcagcctttt
aatccagcttattatgatgaatcttggggcaaggcggttaagaagagagggttatacagt
tttaacccagactggttgccggctttacaggtagaagtagagaatcaagcctcttccatt
acggctttgccagcctttgaacagacaagtggagagttgccattagaagagttagtgcgc
tttgtcagtcacccagcacgatatttcactcagcgccgtttgaagggatatcttaattta
caagcagaacaagagttggaagacgagccttttagtttggaggggttatccgcttatcag
cttaaagacgagcttttacaagccatgctaaagggcgaggaagagcgcttcttggcgcgt
cttgctttgtctggtgtggtgccttacggcgcctttgggcaactttctttgcaacagagt
cagcaacaatgtcatcagctttatcaatttttacaaggctatgctttagaagcattggca
ccagtggaagtcaatctggatttagcaggagtgaaggtgcaagcttggttggatttacac
aatgctaccacgcgtttgtcctatcgcattggtgatatgacggcgaatcagaaaatgcgt
tgttggatcgagcatttggccctgtgcgcgcaaggtacgcctaagcagcatcatctgatt
aacctgttaaagacaggtaaagtattacaacacgagttcactattttaccgccagaagcg
gctcgaacctatctcgcagacttgttaaatttgctgcacacgggcttgtgtgagcctttg
gtgatgccagcgaaaagtgccgatgcttggtgtaaaagttattgcgctgagaaaagccaa
gaagatgaagagcaagcgtggcaacaagccgttaaagtgtatcaagaagccagcaatgcc
tttactagcagtgaagtggaggacgcatattggcagcgctattatccagatataagggct
catcaaacggctttcgtggccttttgtgagcaaatatggttgcccatgacacgccatttg
gagcccattcaatga
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