Marinomonas sp. THO17: THO17_32770
Help
Entry
THO17_32770 CDS
T10670
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
math Marinomonas sp. THO17
Pathway
math03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
math00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THO17_32770 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
math03400
]
THO17_32770 (recD)
Enzymes [BR:
math01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
THO17_32770 (recD)
DNA repair and recombination proteins [BR:
math03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THO17_32770 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
UvrD_C
nSTAND3
AAA_16
Amdase
AAA_28
AAA_17
TrwB_AAD_bind
SRP54
NTPase_1
T2SSE
NPHP3_N
AAA
CbiA
Motif
Other DBs
NCBI-ProteinID:
BFM51114
LinkDB
All DBs
Position
3572403..3574334
Genome browser
AA seq
643 aa
AA seq
DB search
MDSSKQLDWLQQTQDDRREMASPSLTTSGADILFEWRTRGVLNAVDEQWIRQLAEHAGEQ
HLAVLMAGAMTSAALGAGHICMDLAAVWQSPEGLRGDELRHHLSDVQVNSVAQWCAVLQN
SPLVSGIEPLQAKPLVLVGTRLYFYRYYQYEQTVLAYLQKSLSKPVLSVDQSLIQSLFPQ
QNDTVDWQKVAVANAASQAFAVISGGPGTGKTTTVTKLLALLVAQAQQQGQSLRIELAAP
TGKAAARLTESIANAKASLPLDEQVKQGIPEQASTLHRLLGSEFGRSRFKHHQHNPLHLD
VLLVDEVSMVDLPMMAKLIEALPAHARLILLGDKDQLASVEAGSVLGDLSHGIENAYFQP
EWAEHLTRSTGEQLQSFANSSAAPISRALTLLRTSYRFSADSGIGHLAKAMNTGQSDAVF
HCLQQGYEDLAWHVPKEGQPQADVGQLAKGYEAFWQKVRAGDSVDQVHEAFNTYQILTAV
RQGEFGVERINAQLEALFYQRGMIMERHKWYPGKAVMLTRNDATLGLFNGDIGICLADAD
GRLRVWFMQPNGEYLGLLPSRLNEYELVFAMTVHKSQGSEFDQVALVLPLTPSPVLTKEL
LYTGITRAKQGFSLWGTQEVIRMATQSRIKRYSGLLDALWSSP
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggactcttctaaacaactcgattggctgcaacagacgcaagatgacagaagggaaatg
gcatcaccttccttgacaacctctggtgctgacattctcttcgaatggcgcacgagaggt
gtactaaatgccgttgatgaacaatggatacgacagcttgccgagcacgccggtgagcaa
catttggcggtgttaatggccggggctatgaccagtgctgctttgggggcagggcacatt
tgcatggatttggccgctgtttggcagtcccctgaaggtttgcgtggcgatgagttacgt
catcatctgagtgatgtgcaagtgaattccgttgcccagtggtgtgcggtgttacaaaac
tcacctttggtgagtgggattgaacccttgcaggccaagccgttggtattggttgggact
cgcctttatttttatcgctattaccagtacgaacaaacggtactggcttatttacaaaaa
agtcttagcaagccagttttgtcggtagatcagagtttgatacagagtttatttccacag
caaaatgacacagtggattggcagaaagtggcggtggcgaatgcggcgagccaagccttt
gcagtcatcagtggaggtcctggtacaggcaaaaccaccacagtcaccaaattactggcc
ttgttagtggcgcaggcgcaacagcaaggacaaagtttacgtattgaattggcggcgccg
actggtaaagcggcggcgcgacttactgagtcgatcgctaacgctaaggcgtctttgcca
ttggatgagcaggttaagcaaggcattccagaacaagccagtaccttgcaccgtttatta
ggcagcgaatttggccgcagccgttttaaacatcatcagcacaatcccttgcatttggat
gtgttgttggtggacgaagtgtccatggtggatttgcccatgatggcgaaactgatcgag
gcgttaccggcccatgctcgattaatcctattgggcgacaaagatcagttggcctcggtg
gaagcgggcagtgtgttgggggatttgtctcatggtattgaaaacgcttatttccaacct
gaatgggccgagcatttgacaagatcaacaggggaacaacttcaatcgtttgccaactca
tccgccgctccgattagtcgagccttaaccttattacgaaccagctatcgcttctctgcc
gacagtggcatcgggcatcttgctaaagccatgaacacaggacaaagtgatgccgtattt
cattgtttgcagcaagggtatgaggacttggcttggcatgtgccgaaagaagggcaaccc
caagcagatgtagggcaattggcgaaaggctacgaggctttctggcaaaaggtgcgcgcg
ggtgacagtgtggaccaggtacatgaggcgtttaatacatatcagatattgaccgcagtt
cgtcaaggggaattcggcgtagagcgtattaatgctcagttggaagccctgttttatcaa
cgtggcatgataatggaacgacacaaatggtatccgggtaaggcggttatgctgacccgt
aacgatgcgaccttaggcttgttcaatggtgacattggtatttgtttggcggacgctgac
ggtcgattgcgtgtctggtttatgcagcccaacggcgagtatcttggtttgttgcccagt
cgactcaatgaatacgaattggtgtttgccatgacagtacataagtcccaagggtcggag
ttcgatcaggtcgccttggttctaccattaacgccttctcctgtgctgaccaaagaactc
ttgtacacaggcattactcgagccaagcaaggcttttctttgtggggcacacaagaggtg
attcgtatggccacgcaaagtcgtattaaacgttattcaggtttgttggatgccttgtgg
tcaagcccttga
DBGET
integrated database retrieval system
