Marinomonas sp. THO17: THO17_35590
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Entry
THO17_35590 CDS
T10670
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
math Marinomonas sp. THO17
Pathway
math00061
Fatty acid biosynthesis
math00071
Fatty acid degradation
math01100
Metabolic pathways
math01212
Fatty acid metabolism
math02024
Quorum sensing
math04146
Peroxisome
Module
math_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
math00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
THO17_35590 (fadD1)
00071 Fatty acid degradation
THO17_35590 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
THO17_35590 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
THO17_35590 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
math01004
]
THO17_35590 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
math04147
]
THO17_35590 (fadD1)
Enzymes [BR:
math01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
THO17_35590 (fadD1)
Lipid biosynthesis proteins [BR:
math01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
THO17_35590 (fadD1)
Exosome [BR:
math04147
]
Exosomal proteins
Exosomal proteins of breast milk
THO17_35590 (fadD1)
Exosomal proteins of breast cancer cells
THO17_35590 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BFM51396
LinkDB
All DBs
Position
3867037..3868731
Genome browser
AA seq
564 aa
AA seq
DB search
MTMDTSPHNNADNEKMPGSYLPDSLNPSGYQCLTDVLANAVDKYSDLPAYTSVGRTLTYR
ELNEKSDEFAAYLQNETDLLPGDRIAIQLPNIIQYPIVLFGAMKAGMVVVNTNPLYTPKE
LEHQFNDANVKALVVFANMASNVEKILAQTSIQHVIITQIADLHSPVKRLLVNSVVKYVK
KMVPPYHIQGALTLNQALAKGRGKSVKTVSLKPAEIAVLQYTGGTTGVAKGAMLTNANLL
ANMYQLSSRLETIIEERTETYIAPLPLYHIYAFLIHGLTLLERGAHSILIPNPRDLPGFV
SELKKWKFTGFVGLNTLFVGLCNREDFRALDFSGLKLTCSGGMPLTHAAADEWKRITGCQ
VVEGYGLTETSPVVSFNPIGKERIGTIGLPVGETDIKIQGDNGEALPQGESGMLCVRGPQ
VMKGYWNREDATREVMTEDGFLITGDIAMQHEDGYLQIVDRAKDMIIVSGFNVYPTEVED
CISSHPSILESAAIGVPDDKTGEAVKAFVVMKADETIDIETLRAFCKEHLAAYKVPKHIE
VRTELPKTNVGKVLRRALREEMAG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggatacttctcctcataacaacgcagataacgagaaaatgccaggaagctat
ttaccagattcgctcaatcctagtggctatcaatgtctaacggatgtactggctaatgcg
gtagataaatattccgatttgcccgcttataccagtgtgggtcgtaccctcacataccgt
gaactgaatgaaaaatctgatgagttcgcagcttacttacaaaacgaaaccgatttgtta
cccggtgatcgtattgccattcaattacctaatatcatccagtatccgattgtacttttt
ggtgccatgaaagcgggtatggtggtggtcaataccaatccactttataccccgaaagag
ctggagcaccagtttaatgatgccaatgtaaaagccttggtggtgttcgccaatatggcg
agtaacgtggaaaaaattctggctcaaaccagcattcagcacgttattatcacgcagatt
gctgatctacattcacccgtaaaacgtttgttggtgaattcggtggtcaaatacgtcaag
aagatggtaccaccatatcacattcaaggagcgctaacccttaatcaagccttggccaaa
gggcgtggtaaaagtgtcaaaaccgtctcacttaaacccgctgagattgccgtgttgcaa
tataccggtggtacgactggggtggccaaaggcgccatgctgacaaacgctaacttgtta
gccaatatgtatcaattaagttcgcgcttagagaccatcattgaagaacgaacagaaacc
tacatcgcacctttacccttgtatcatatctatgctttcttgattcatggcttaaccttg
cttgaacgcggtgcgcacagtattttgatcccgaatccacgagatttacctgggtttgtt
agcgaattgaaaaagtggaagttcaccggttttgttggcctgaataccttatttgttggg
ctttgcaaccgtgaagatttccgcgctttggatttttccggcttgaagttgacttgttct
ggtggcatgcctttgactcatgctgcagcagatgagtggaagcgtattacgggttgccaa
gtggttgaaggctatggtcttaccgaaacgtcacctgtggtgtctttcaatccaataggt
aaagaacgcattggtaccattggtttgcctgtgggtgaaaccgacatcaagattcaaggt
gataatggtgaggcattgccacaaggcgaatccggtatgttgtgtgtgcgtggcccgcaa
gtgatgaagggctattggaatcgtgaggatgcgacccgtgaggtcatgaccgaagatggt
ttcctcatcacgggtgacatcgccatgcagcatgaagatggttatttgcaaatcgttgat
cgcgctaaagatatgatcatagtgtctggtttcaatgtatatccaacagaagtggaagat
tgcatttcctcccatccttcgattcttgaatcggctgccatcggcgtgccggatgataaa
acaggtgaagcggtaaaagctttcgtcgtgatgaaagcggatgaaaccattgatatagaa
acactgagagcattttgtaaggagcatttggctgcctacaaggtgcccaagcacattgaa
gtacgtactgaactgcctaagacgaatgtcggtaaagtattacgtcgtgctttgcgcgaa
gaaatggcaggctaa
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