Marinomonas sp. THO17: THO17_35640
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Entry
THO17_35640 CDS
T10670
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
math Marinomonas sp. THO17
Pathway
math00071
Fatty acid degradation
math00280
Valine, leucine and isoleucine degradation
math00310
Lysine degradation
math00362
Benzoate degradation
math00380
Tryptophan metabolism
math00410
beta-Alanine metabolism
math00640
Propanoate metabolism
math00650
Butanoate metabolism
math00907
Pinene, camphor and geraniol degradation
math00930
Caprolactam degradation
math01100
Metabolic pathways
math01110
Biosynthesis of secondary metabolites
math01120
Microbial metabolism in diverse environments
math01200
Carbon metabolism
math01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
math00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
THO17_35640 (fadB)
00650 Butanoate metabolism
THO17_35640 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
THO17_35640 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
THO17_35640 (fadB)
00310 Lysine degradation
THO17_35640 (fadB)
00380 Tryptophan metabolism
THO17_35640 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
THO17_35640 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
THO17_35640 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
THO17_35640 (fadB)
00930 Caprolactam degradation
THO17_35640 (fadB)
Enzymes [BR:
math01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
THO17_35640 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
THO17_35640 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
THO17_35640 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
THO17_35640 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
BFM51401
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All DBs
Position
3872144..3874294
Genome browser
AA seq
716 aa
AA seq
DB search
MIFEGQAVKVAVDDAGVATVTLDLAGESVNKFNSLTLSELSKAVDTLKQTDDLKGVVFAS
AKDVFVVGADITEFMTWFKLSDEELTDKLRDAHNIFNDISNLPCPTVAAINGIALGGGME
LVLSCDYRVMADSAKIGLPETQLGIYPGWGGTVRLPRLIGVDNACEWICGGAQKRSADAM
KDGAVDAVVALDKVQDSARHLIQQVMDGKLDYKARRDELRAPMVFTPIEKMMIFESVRGV
VGAKAGKHYPAPMAAIKTMEKGISQSMDKAIETEIKGFIKLAKGPVAKSLVNLFLSDQAI
KKTAGKLSKGATPVTQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRQDALDLGLSEANKL
FNGQVERGRLTTDKALKAMNGITPALSYGEFDHVDLVVEAVVENVNIKKSVLAEVEDKIA
EDAILTSNTSTISITELAKALKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDEAIAKTVA
YAQAMGKTPVVVNDCPGFLVNRVLFPYFAGFSLMMQEGADFQVVDKTMERFGWPMGPAYL
LDVVGVDTAYHADQVMADGFPDRMKHEGKNAVDRLFELERFGQKNGKGFYTYEPDRKGKP
KKIFNEEINELLAPVVTSKTELSEEDIIARMMIPLCIETVRCLEEKIVSSAAEADMGLIY
GIGFPPYLGGALHYLDQMGLQAFCDLADKYSHLGKLYEPTAKMREMAKNNETYYSA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgaaggacaagcagtcaaggttgcagtcgatgatgccggtgtggcaaccgtc
actctggatttggctggtgagtcagttaacaagtttaacagtcttaccttaagcgagctg
tcaaaggccgttgatactctaaagcaaactgacgatctaaaaggcgttgtctttgccagt
gcaaaagacgtgtttgttgtcggtgccgacatcaccgagtttatgacttggtttaagctc
tctgatgaagagttaacagataaattgcgcgatgcacacaacatttttaacgatatttct
aacttaccatgtccaacggttgcagccattaacggtattgcattaggcggtgggatggaa
ttggtgttgtcttgtgattatcgtgtgatggccgattcagcgaaaattggtcttcctgaa
acccagttaggtatctatccaggttggggggggacggtgcgtctacctcgcctcattggt
gtggacaatgcctgtgaatggatttgtggcggcgcacaaaaacgcagtgcggatgctatg
aaagacggcgcggtcgatgccgttgttgccctagacaaagttcaagactctgcacgtcat
ctcattcaacaagtgatggatggcaaactggattacaaagctcgccgtgatgaattgcgt
gctccgatggtgttcacaccgattgagaaaatgatgattttcgaatcggttcgtggtgtg
gttggagcgaaagcgggcaaacattaccctgctccaatggcagccatcaaaaccatggaa
aaaggcattagccagtcaatggacaaagccattgagacggaaattaaaggtttcatcaag
ttggctaaagggccggttgcgaaatctttggttaatctcttcttaagtgatcaagctatt
aagaaaaccgcaggcaagttatcaaaaggcgctacaccagtaacacaagctgccgttttg
ggggccggtatcatggggggcggtgtggcttatcagtccgcttcgaaaggcacgcctatc
atcatgaaagacattcgccaagacgctttagatcttggtttgagtgaagcgaacaaattg
tttaatggacaagttgagcgtggtcgtttgaccacagacaaagcgttaaaagccatgaat
ggcattacaccagccttgagctacggcgagtttgatcatgtagatcttgtggtggaagcg
gttgttgagaacgtgaatatcaaaaaatcggttttggctgaagtagaagacaagattgca
gaggatgctattcttacttcgaacacttccactatttccatcaccgaactggccaaagcg
ctaaaacgtccagaaaacttctgtggtatgcacttctttaaccctgtgcatcgcatgcct
ttggtagaagttatccgcggtgaaaagaccagtgatgaagccattgctaagaccgtggct
tacgcgcaagccatgggcaaaacgccagtggtggtgaatgattgccctggtttcttggta
aaccgagttctcttcccttacttcgcaggtttctctttgatgatgcaagaaggggcggat
ttccaagtagttgataagactatggagcgtttcggctggccaatgggtccggcttacttg
cttgacgtagtgggtgtggatacagcttatcacgccgatcaggtgatggcagatggcttc
ccagatcgcatgaagcacgaaggcaaaaatgccgttgaccgtttgtttgaattagagcgt
tttggtcagaaaaatggtaagggcttctacacttatgagccagatcgtaagggtaagccg
aagaaaattttcaatgaagaaatcaatgagctgcttgctcccgttgtgacctctaaaacg
gaattaagcgaagaggatattatcgctcgtatgatgattccattgtgtattgagacagta
cgctgtttggaagagaagattgtttcttctgccgctgaagcggacatgggcttgatttac
ggtatcggtttccctccttacttgggcggtgctcttcattacttggatcagatgggactg
caagcattttgtgaccttgcagataaatacagccacttaggtaagttgtacgagccaacc
gcgaagatgcgtgaaatggcgaaaaacaacgaaacttactacagcgcttaa
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