Micromonospora aurantiaca: Micau_1494
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Entry
Micau_1494 CDS
T01296
Name
(GenBank) RNA-metabolising metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mau
Micromonospora aurantiaca
Pathway
mau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Micau_1494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mau03019
]
Micau_1494
Messenger RNA biogenesis [BR:
mau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Micau_1494
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ADL45052
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Position
1552385..1554073
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AA seq
562 aa
AA seq
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MTEAHIEGELPPPLPEGGLRIIPLGGLGAIGRNMTVFEYDGKLLIVDCGVLFPDVEQPGV
DLILPDFGPILDRLADVQAIVLTHGHEDHIGAVPYLLAHKPDIPLVGSQFTLALVEAKLA
ERRIQPYTLTVREGGRERLGPFECEFFAVNHSIPDALAVAIRTPAGLVLHTGDFKMDQLP
LDGRITDLAGFARLGAEGVDLLLSDSTNAEIPGFVTPEREIGPVLDSIFAKAKGRIIVAS
FASHVHRVQQVFDSAVEHGRKVALIGRSMVRNMGIARDLGLLNIPPGLVVGIEEATNLPP
EQIVLMSTGSQGEPMSALGRMASGDHRHITIAPGDTVVLASSLVPGNETSVYRVINRLAR
AGAVVVHKDVAKVHVSGHAPAGELLYLLNVVRPSNLMPVHGEWRHLRAHARLGIESGVAP
DRVVLCEDGDVVDLVEGRASLVGRVKSRYVYVDGLAVGDVSESLLTERRILGDGGFIAAT
VVVDSVTGKVVAGPTVSAKGFSEDPEAFNAVVPLVTEALNRAAADGITDPHQLQQIVRRT
VGRWVNDAYRRRPMIVPTVVEV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaggcgcacatcgagggtgaactgcccccgccgctgcccgagggcggcctgcgg
atcatcccgctcggcggactcggcgccatcggccggaacatgaccgtcttcgagtacgac
ggcaagctgctgatcgtcgactgcggggtgctgttccccgacgtcgagcagccgggcgtg
gacctgatcctgcccgacttcggcccgatcctggaccggctggccgacgtgcaggcgatc
gtgctcacgcacggccacgaggaccacatcggcgcggtgccgtacctgctcgcgcacaag
ccggacatcccgctggtgggctcgcagttcacgctcgcgctcgtcgaggcgaagctggcc
gagcggcggatccagccgtacacgctgaccgtgcgggagggcggccgggaacggctgggc
ccgttcgagtgcgagttcttcgcggtgaaccactcgatcccggacgcgctggcggtggcc
atccgtacgccggccggcctggtgctgcacaccggcgacttcaagatggaccagcttccg
ctcgacgggcggatcaccgacctggccgggttcgcccggctcggcgccgagggcgtcgac
ctgctgctgtccgactcgacgaacgcggagatccccgggttcgtcacgccggagcgggag
atcggcccggtcctcgactcgatcttcgcgaaggccaaggggcggatcatcgtcgcctcg
ttcgcctcgcacgtgcaccgggtgcagcaggtcttcgactcggccgtcgagcacggccgc
aaggtggcgctgatcggccggtccatggtccgcaacatgggcatcgcccgcgacctgggc
ctgctcaacatcccgcccggcctggtggtcgggatcgaggaggccacgaacctgccgccc
gagcagatcgtgctgatgtccaccggttcgcagggcgagccgatgagcgcgctgggccgg
atggccagcggcgaccaccggcacatcaccatcgcccctggcgacacggtggtgctggcg
tcctcgctggtgcccggcaacgagacctcggtctaccgggtgatcaaccggctcgcccgg
gccggcgccgtggtggtgcacaaggacgtcgcgaaggtgcacgtctccggccacgccccg
gccggtgagctgctctacctgctcaacgtggtacgcccgagcaacctgatgccggtgcac
ggcgagtggcggcacctgcgggcgcacgcccggctcggcatcgagtccggcgtcgcgccg
gaccgggtcgtgctctgcgaggacggcgacgtggtcgacctggtcgagggccgcgccagc
ctggtcgggcgggtcaagagccggtacgtctacgtcgacggtctcgccgtcggcgacgtc
agcgagtcgctgctcaccgaacgccggatcctgggcgacggcgggttcatcgccgcgacg
gtcgtggtcgactcggtcaccggcaaggtggtcgccggcccgaccgtctcggcgaagggc
ttctccgaggacccggaggcgttcaacgcggtggtcccgctggtcaccgaggcgctgaac
cgggccgccgcggacggcatcaccgacccgcaccagctccagcagatcgtccgccgcacg
gtgggccgctgggtcaacgacgcgtaccgccgtcggcccatgatcgtcccgaccgtcgtc
gaggtctga
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