Micromonospora aurantiaca: Micau_2156
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Entry
Micau_2156 CDS
T01296
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mau
Micromonospora aurantiaca
Brite
KEGG Orthology (KO) [BR:
mau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mau03019
]
Micau_2156
Enzymes [BR:
mau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Micau_2156
Messenger RNA biogenesis [BR:
mau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Micau_2156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
NACHT
AAA_16
SLFN-g3_helicase
AAA_25
DUF2968
PhoH
Motif
Other DBs
NCBI-ProteinID:
ADL45701
LinkDB
All DBs
Position
complement(2297470..2301465)
Genome browser
AA seq
1331 aa
AA seq
DB search
MQNPAVPAAPETARDLHRRLAPLMFRDQRRIQRRLDGVRRLRDPQRREAALAEIGAEVTR
AEARLESRRAAVPAITYPPQLPVSERKDDIAAAIRDHQVVIVAGETGSGKTTQLPKICLE
LGRGVTGLIGHTQPRRLAARTVADRIADELGTELGDVVGYKVRFTDQVGDNSLVKLMTDG
ILLAELQTDRMLRQYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVVITSATIETDR
FAKHFADAEGNPAPVVEVSGRTYPVEVRYRPLVEVTEADEEDEADEENVRDQIQAIGDAV
EELAAEGPGDILVFLSGEREIRDTADALGKLVQSKRSLLGTEILPLYARLSTAEQHRVFA
AHSNRRVVLATNVAETSLTVPGIKYVVDPGTARISRYSSRLKVQRLPIEPVSQASANQRK
GRCGRTSDGICIRLYDEQDFDSRPEFTDPEILRTNLASVILQMTSIGLGDVAAFPFIDPP
DRRNVTDGVNLLHELGALDPAETDPAKRLTALGRRLAQLPVDPRLARMVLEGERNGCATE
VVVIAAALSIQDPRERPADKQAQADQAHARFADKESDFVAYLNLWRYLREKQRELSSSAF
RRMCKAEYLNYLRVREWQDIVSQLRQVLRTSDKGEGRRGAGADLPEEIDTPKVHQSLLPG
LLSHLGLKDAQKHEYLGARGAKFAIFPGSALFRKPPRWVMAAELVETSRLWGRVAGRVEP
EWVEPLAQHLVKRSYSEPHWEKKQAAVMAYEKVTLYGIPIVTSRKVNFGRIDAGLSRELF
IRHALVEGDWQTHHQFWRDNQKLLTEIEELENRARRRDILVDDETIFAFYDQRIPADVVS
GRHFDSWWKKTRRERPDLLTFTRELLVNDGRGGVDEEDFPDQWRADGVTLPLTYTFDPTA
PTDGVTVDIPLPLLNQVPAESFDWQVPGLREELVIALIRSLPKPVRRNFVPVPDYARAAL
AAITPGEEPLLAALTRQLRRMTGVTVPADAWDLGRLPPHLRVTFRVLGDDDKPVAEGKDL
PALQRELRQEVRQVVAAAAPDVARTGLTEWSIGALPRTIEQVRAGFAVTAYPALVDEGAT
VGVKVFDSAAEQEAAHWAGTRRLLRLTMPSPAKFLQGRLSNEAKLALSRNPHGSVPELIE
DAAGAAIDKLIGDAGGPAWDAEGFAALRDRVRADLVDTVVEVMERVRRVLASAYAVEQRL
GATRNLAVVAALADIRNQLTGLVHKGFITETGYARLPDLLRYLTAIERRLDRLPGNPQRD
KQQQDRVAVVQKEYQDMLAALPPPRRASAAVRQIRWMIEELRVNVFAQALGTPYPVSEQR
IYRAMDDAEAR
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatccagccgtacccgccgcccctgagaccgcccgcgacctgcaccgccgcctc
gcccccctgatgttccgcgatcagcgccggatccagcggcggctcgacggcgtgcgccgg
ctgcgcgacccgcagcggcgggaggcggcgctggccgagatcggggccgaggtgacccgg
gccgaggcgcggctggagtcgcgccgcgcggccgtcccggcgatcacctacccgccgcag
ttgccggtcagcgagcgcaaggacgacatcgccgccgcgatccgcgaccaccaggtggtg
atcgtggccggtgagaccggctccgggaagacgacccagctccccaagatctgcctggaa
ctggggcgcggggtcaccggcctgatcgggcacacccagccccgccggctggcggcccgc
acggtcgccgaccggatcgccgacgaactcggcaccgagctgggcgacgtggtcggctac
aaggtgcgtttcaccgatcaggtgggcgacaacagcctggtcaagctgatgaccgacggc
atcctgctggccgagttgcagaccgaccggatgctgcggcagtacgacacgctgatcatc
gacgaggcgcacgagcgcagcctcaacatcgacttcatcctcggctatctcaggcagctc
ctgccccgacggcccgacctcaaggtcgtcatcacctcggccaccatcgagaccgaccgg
ttcgcgaaacacttcgccgacgccgagggcaacccggcgccggtggtcgaggtgtccggg
cgcacgtacccggtggaggtccgctaccggccgctggtcgaggtcaccgaggccgacgag
gaggacgaggccgacgaggagaacgtccgggaccagatccaggccatcggcgacgcggtc
gaggagctggccgccgaggggccgggcgacatcctcgtgttcctcagcggggagcgggag
atccgggacaccgccgacgcgctgggcaagctggtgcagtccaagcggtcgctgctcggc
accgagatcctgccgctgtacgcccggctgtccaccgccgagcagcaccgggtcttcgcc
gcgcactccaaccgccgggtggtgctggccacgaacgtcgcggagacctcgctgacggtg
cccggcatcaagtacgtggtggacccgggcaccgcccggatctcccgctactccagccgg
ctcaaggtgcagcggctgccgatcgagccggtctcgcaggccagcgccaaccagcgcaag
ggccgctgcgggcgtacctcggacggcatctgcatccgcctctacgacgagcaggacttc
gactcccgccccgagttcaccgacccggagatcctgcggaccaacctggcctcggtcatc
ctccagatgacctcgatcgggctcggcgacgtcgcggcgttcccgttcatcgacccgccg
gaccggcgcaacgtcaccgacggcgtgaacctgctgcacgagctgggcgcgctcgacccg
gccgagaccgacccggcgaagcggctcaccgcgctgggccggcggctggcccagctcccg
gtcgacccccggctggcccggatggtcctcgaaggcgagcgcaacggctgcgccaccgag
gtcgtggtgatcgccgccgcgctgtccatccaggatccccgggaacgcccggccgacaag
caggcccaggccgaccaggcgcacgcccggttcgccgacaaggagtccgatttcgtcgcg
tacctgaacctgtggcgctacctgcgggagaagcagcgggagctgtcgtccagcgcgttc
cgccggatgtgcaaggccgaatacctcaactacctccgggtacgcgagtggcaggacatc
gtcagccagttgcgccaggtgctgcgtacctccgacaagggtgagggccggcgcggcgcc
ggcgccgacctgccggaggagatcgacaccccgaaggtgcaccagtcgctgctgcccggc
ctgctgtcgcacctcggcctcaaggacgcgcagaagcacgaatacctgggcgctcggggc
gcgaagttcgcgatcttccccgggtcggcgctgttcaggaagccgccgcgctgggtgatg
gcggccgagctggtggagacgtcccggctgtgggggcgggtggccgggcgggtcgagccg
gagtgggtcgagccgctggcccagcacctggtgaagcgcagctacagcgagccgcactgg
gagaagaagcaggccgcggtgatggcctacgagaaggtcacgctgtacggcatcccgatc
gtcacctcccgcaaggtgaacttcgggcggatcgacgcaggtctgagccgcgagctgttc
atcaggcacgccctggtcgagggcgactggcagacccaccaccagttctggcgggacaac
cagaagctgctgaccgagatcgaggagctggagaaccgggcccggcgtcgcgacatcctg
gtcgacgacgagaccatcttcgccttctacgaccagcggatccccgccgacgtggtctcc
ggccggcacttcgactcgtggtggaagaagacccgccgggagcggcccgacctgctcacg
ttcacccgcgagctgctcgtcaacgacggccggggcggggtggacgaggaggacttcccg
gaccagtggcgggccgacggggtgacgctgccgctgacgtacacgttcgacccgaccgcg
cccaccgacggcgtcactgtggacatcccgctgccgctgctcaaccaggtgccggcggag
agcttcgactggcaggtgccggggctgcgcgaggaactggtgatcgcgctgatccggtcg
ctgcccaagccggtacggcgcaacttcgtgccggtgcccgactacgcgcgcgccgcgctc
gccgcgatcacaccgggcgaggagccgctgctggccgcgctgacccggcagctgcgccgg
atgaccggggtgacggtcccggccgacgcgtgggacctcggcaggctgccgccgcacctg
cgggtcacgttccgggtgctcggcgacgacgacaagccggtcgccgagggcaaggacctg
ccggcgctgcaacgtgagctgcgccaggaggtacgccaggtcgtggccgccgccgcgccc
gacgtggcccggaccgggctgaccgagtggtcgatcggcgcgctgccgcgcaccatcgag
caggtacgcgcaggcttcgcggtgaccgcgtacccggcgctggtggacgagggcgcgacg
gtcggggtgaaggtgttcgactccgccgccgagcaggaggccgcgcactgggcgggcacc
cggcggctgctgcggctgacgatgccgtcaccggcgaagttcctccaggggcggctgagc
aacgaggcgaagctggcgctgtcccgcaacccgcacggcagcgtgccggagctgatcgag
gacgcggccggcgcggcgatcgacaagctgatcggcgacgcgggcggcccggcctgggac
gccgagggcttcgccgcgctgcgcgacagggtccgcgccgacctggtggacaccgtggtc
gaggtgatggagcgggtacgccgggtgctcgcttccgcgtacgcggtggagcagcggctc
ggcgccacccgcaacctcgccgtggtggccgcgctggccgacatccgcaaccagctcacc
ggcctggtgcacaagggtttcatcaccgagacggggtacgcgcgcctgcccgacctgctg
cgctacctgaccgcgatcgagcggcggctggaccggttgccgggcaacccgcagcgggac
aagcagcagcaggatcgcgtcgccgtggtgcagaaggagtaccaggacatgctggccgcg
ctgcccccgccgcgacgtgcctcggcggcggtccgccagatccgctggatgatcgaggag
ctgcgggtgaacgtcttcgcccaggccctgggaaccccctaccccgtctcggagcagcga
atctaccgagccatggacgacgccgaggcccgctga
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