Micromonospora aurantiaca: Micau_3431
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Entry
Micau_3431 CDS
T01296
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mau
Micromonospora aurantiaca
Pathway
mau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Micau_3431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mau03019
]
Micau_3431
03009 Ribosome biogenesis [BR:
mau03009
]
Micau_3431
Enzymes [BR:
mau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Micau_3431
Messenger RNA biogenesis [BR:
mau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Micau_3431
Ribosome biogenesis [BR:
mau03009
]
Prokaryotic type
rRNA helicases
Micau_3431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
ADL46959
LinkDB
All DBs
Position
3846057..3847814
Genome browser
AA seq
585 aa
AA seq
DB search
MNAAPTPTDPALPADAEDGIAFADLGLRTELLGALSALGYEEPTPIQREAIPPLLAGQDL
LGQAATGTGKTAAFALPLLQRMPVGRADGDPVSLVLVPTRELAVQVSEAFHRYGKDLGAR
VLPIYGGQPIGRQLRALDHGVDVVVATPGRALDHIARGTLRLGALSTVVLDEADEMLDMG
FAEDIEAILEHAPAGRQTVLFSATMPARIDGLARQHLTDPVRIRIERERPVAGEAPRVRQ
SAYIVARAHKPAALGRVLDVESPTAAIVFCRSREEVDRLTETMNGRGYRAEALHGGMSQE
QRDRVMGRLRAGTADLLVATDVAARGLDVEQLTHVVNYDVPSAPESYVHRIGRVGRAGRE
GVAITLAEPREHRMLKTIERVTGQRIAIDKIPTVADMRTRRLELTQGALRESLLEDDLDP
YRAIVESLTDEFDLVEVALAAVKLAHEATSPGSDDEEEIPQVPVRGPREGRPEAGGRGER
RGPARPRTGGTTQVFIGLGRRAGVRPQDLVGAITGETRISGRDIGSIEIADRFSLVEVPQ
GVADEIIAGLRGTTIKGRKATVRRDRDGDGPGERRDRGYERRDRR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaccgaccccgaccgaccccgcccttcccgccgacgccgaggacggcatc
gccttcgccgatctcgggctgcgcaccgagttgctgggcgcgctgtccgcgctcggctac
gaggaaccgacgccgatccagcgggaggccatccccccgttgctggccgggcaggatctg
ctgggccaggcggcgaccggtacgggcaagaccgccgcattcgcgctgccgctgttgcag
cggatgccggtggggcgggccgacggcgacccggtgtcgctggtgctggtgccgacgcgg
gagctggccgtgcaggtctccgaggcgttccaccgctacggcaaggacctgggcgcccgg
gtgctgccgatctacggcgggcagccgatcggccggcagctgcgtgcgctcgaccacggg
gtggacgtggtggtggcgacgcccggccgggcgctggaccacatcgcccggggcacgctg
cggttgggcgcgctgagcacggtggtgctggacgaggcggacgagatgctcgacatgggc
ttcgccgaggacatcgaggcgatcctggagcacgctccggccggccggcagacggtgctg
ttctcggccaccatgccggcccggatcgacgggctggcccggcagcacctgaccgacccg
gtccgcatccggatcgagcgggagcggcccgtcgccggggaggcgccccgggtgcggcag
agcgcgtacatcgtggcccgggcgcacaagccggccgcgctgggccgggtgctggacgtg
gagtcgcccaccgcggcgatcgtgttctgccgcagccgggaggaggtggaccggctcacc
gagacgatgaacggccggggctaccgggccgaggcgctgcacggcgggatgagccaggag
cagcgggaccgggtgatgggccggctgcgcgccggtacggcggacctgctggtcgccacc
gacgtggccgcccgtggcctggacgtcgagcagctcacccacgtggtcaactacgacgtg
ccgtccgccccggagtcgtacgtgcaccggatcgggcgggtcggccgggccgggcgggag
ggtgtggcgatcacgctcgccgagccgcgtgagcaccggatgctcaagaccatcgagcgg
gtcaccggccagcggatcgccatcgacaagatccccactgtcgcggacatgcgtacccgg
cggctggagctgacccagggcgcgctgcgggagagcctgctggaggacgacctcgacccg
taccgggcgatcgtggagtcgctcaccgacgagttcgacctggtcgaggtggcgctggcg
gcggtgaagctggcgcacgaggcgacgtcgccgggctcggacgacgaggaggagatcccg
caggttccggtccggggtccgcgcgagggccgcccggaggccggcgggcggggtgagcgc
cggggtccggcgcgcccgcgtaccggcggcaccacccaggtcttcatcggtctgggccgc
cgggccggggtacggccgcaggacctggtgggcgcgatcaccggggagacccgcatcagt
ggccgggacatcggctcgatcgagatcgccgaccggttctcgctggtcgaggtgccgcag
ggggtcgccgacgagatcatcgcggggctgcgcggcaccaccatcaagggacgcaaggcg
acggtacgccgggaccgggacggtgacgggccgggcgagcgccgcgaccggggctacgag
cggcgcgaccgccgctga
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