Micromonospora aurantiaca: Micau_3552
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Entry
Micau_3552 CDS
T01296
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mau
Micromonospora aurantiaca
Pathway
mau00040
Pentose and glucuronate interconversions
mau01100
Metabolic pathways
mau02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Micau_3552
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Micau_3552
Enzymes [BR:
mau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Micau_3552
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ADL47079
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Position
3975820..3977163
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AA seq
447 aa
AA seq
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MRTRTAAVAALAAALVLTTAAPAPAAPGKPSRAAELIGRQTLPANDGWAAAGTGTTGGSA
AAPDRVHVVRTRAELVAALGGDNATNAADATPKIVYVAGTVDGFEGPDGTLLDCADLADP
EYSLPAYLAAYDPATWGRVNPSGPLEAARVRSVAEQTRQTQINVGSNTTIVGLRGARLTG
LTLMIDRVANVIVRNIEFADARDCFPAWSPADGDTGNWNSQYDQISVRRSEHVWIDHNTF
TDGDNPDSAQPVYFGRPWQVHDGSVDVTHTASLVTVSWNRFTGRDKVMLIGSSNTVGPDV
GRLNVTVRHNLFDGTLQRLPRVRFGQVDVHENHYRLGGPGFAYALGVGVQSALYAENNFF
TLTGDTGPADLLYDWGGTALTERGSWVRQGDRLPRPVDLRAAYNAAHDPDLGGDAGWTPT
LRAARPLPAPLVPFVVDAFAGAGRLPL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccgaaccgcagccgtcgcggcgctggccgccgcgctcgtcctcaccaccgcc
gcgcccgcgccggccgcacctggtaagccgtcccgggccgccgagctgatcggccgccag
accctcccggcgaacgacggctgggccgccgcgggcaccggcaccaccggcgggtcggcc
gccgcgccggaccgggtacacgtcgtgcgtacccgcgccgagctggtcgccgcgctcggc
ggcgacaacgccacgaacgccgccgacgccacccccaagatcgtgtacgtggccgggaca
gtcgacggtttcgaaggaccggacggcaccctgctggactgcgccgacctggccgacccg
gagtactcgctgcccgcctacctggccgcgtacgacccggcgacctggggccgggtcaac
ccgagcggaccgctggaggccgcccgggtgcgttcggtggccgagcagacccggcagacg
cagatcaacgtcggctcgaacaccactatcgtcgggctgcgcggcgcgcggctcaccggc
ctgacgctgatgatcgaccgggtggccaacgtgatcgtgcgcaacatcgagttcgccgac
gcccgggactgcttcccggcctggtcccctgccgacggcgacacgggcaactggaactcc
cagtacgaccagatctcggtgcgccgcagcgagcacgtctggatcgaccacaacacgttc
accgacggcgacaacccggacagcgcccagcccgtctacttcgggcggccctggcaggtg
cacgacggctcggtggacgtcacgcacaccgccagcctggtcaccgtgtcgtggaaccgg
ttcaccggccgggacaaggtgatgctcatcggctcgtcgaacacggtcggcccggacgtg
ggccggctcaacgtcaccgtgcggcacaacctgttcgacggcacgctgcaacggctgccc
cgggtccggttcggccaggtcgacgtgcacgagaaccactaccggctcggcgggcccggc
ttcgcgtacgccctcggcgtcggcgtgcagtccgcgctgtacgcggagaacaacttcttc
acgctcaccggcgacaccggccccgccgacctgctgtacgactggggcggcaccgcgctc
accgagcggggcagctgggtccggcagggtgaccgcctgccccggccggtggacctgcgc
gccgcgtacaacgccgcccacgaccccgacctcggcggcgacgccgggtggacgcccacg
ctgcgcgccgcccggccgctgccggccccgctggtcccgttcgtcgtcgacgccttcgcc
ggcgccgggcggctgccgctctga
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