Micromonospora aurantiaca: Micau_4341
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Entry
Micau_4341 CDS
T01296
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mau
Micromonospora aurantiaca
Pathway
mau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Micau_4341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mau03019
]
Micau_4341
03400 DNA repair and recombination proteins [BR:
mau03400
]
Micau_4341
Enzymes [BR:
mau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Micau_4341
Messenger RNA biogenesis [BR:
mau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Micau_4341
DNA repair and recombination proteins [BR:
mau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Micau_4341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ADL47854
LinkDB
All DBs
Position
4916999..4918855
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AA seq
618 aa
AA seq
DB search
MVSPTDERTTSPPAGDALDVLRRVFGYDAFRGFQQEVVEHVVAGGDALVLMPTGGGKSLC
YQIPALVRDGVAVVVSPLIALMQDQVDALTAVGVRAGFLNSTQDPAQRRRVEAAYLAGEL
DLLYLAPEGLAVRSTLGLLERGRVALFAIDEAHCVSQWGHDFRPDYLNLSMLHERWPDVP
RIALTATATQATRTEIATRLRLTEARHFVASFDRPNIQYRIVPKREPRRQLLSLLRDEHS
GDAGIVYCLSRASVEKTAEFLVANGIPALPYHAGLDASTRAANQQRFLREDGLVMVATIA
FGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIETS
EGDLAHRRNLAAHLDAMLALCETVRCRRSQLLEYFGETGVADCGNCDTCLEPPESWDGTV
AAQKLLSTVFRLDRERNQRFGAGHSIDILLGKHTDKIDQYGHDALSTFGIGTELREAEWR
GVVRQLLAEGLLAVEGDYGTLALTEASADVLGRRRTVTLRKEPERPAAGRSAKPRGAATV
VADLSPAAAPVFERLRAWRAATAKEQGVPAYVIFHDATLRQIAAEPPTSLAELSRFNGVG
ENKLAKYGEAILAVLAES
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccccaccgacgagcggaccacctccccaccggccggcgacgcgctcgacgtg
ttgcgccgcgtcttcgggtacgacgccttccgcggcttccagcaggaggtcgtcgagcac
gtggtggccggcggcgacgcgctggtgctcatgcccaccggtggcggcaagtcgctgtgc
taccagatccccgcgctggtccgcgacggtgtggcggtggtcgtctccccgctcatcgcg
ctcatgcaggaccaggtcgacgccctgacggcggtcggcgtccgggccgggttcctcaac
tcgacccaggatcccgcgcagcggcgccgggtcgaggcggcctacctcgccggcgagctg
gacctgctctacctcgccccggaagggctcgcggtgcggtccacactcggcctgttggaa
cgcggccgggtcgcgttgttcgcgatcgacgaggcgcactgcgtctcgcagtgggggcac
gacttccgccccgactacctcaacctgtcgatgctgcacgaacgctggccggacgtgccg
cggatcgcgctgaccgccaccgcgacgcaggcgacccgcaccgagatcgccacccggctg
cggctcaccgaggcccggcacttcgtggccagcttcgaccggcccaacatccagtaccgc
atcgtgcccaagcgggagccgcgccgccagctgctcagcctgctgcgcgacgagcactcc
ggcgacgccggcatcgtctactgcctgtcccgcgcctcggtggagaagaccgccgagttc
ctggtcgccaacggcatccccgcgctgccgtaccacgccgggctggacgcctcgacccgc
gccgccaaccagcagcgtttcctgcgcgaggacggtctggtcatggtcgccaccatcgcg
ttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcccacctggacctgccgaag
tcggtggagggctactaccaggagaccggccgcgccgggcgcgacgggctgccgtccacg
gcctggctggcgtacggactccaggacgtcgtgcagcagcgcaagatgatcgagacgtcg
gagggcgacctggcgcaccggcgcaacctcgccgcccacctggacgccatgctggcgctc
tgcgagacggtccgctgccgccgctcccaactgctcgaatacttcggcgaaaccggcgtg
gccgactgcggcaactgcgacacctgcctcgaaccaccggagtcctgggacggcaccgtc
gccgcgcagaagctgctgtccaccgtcttccggctcgaccgcgagcgcaaccagcggttc
ggcgccgggcacagcatcgacatcctgctcggcaagcacaccgacaagatcgaccagtac
ggccacgacgcgctcagcacgttcggcatcggcaccgagctgcgcgaggccgagtggcgt
ggggtggtgcggcaactgctggccgagggtctgctcgcggtcgagggcgactacggcacg
ctggcgctgaccgaggcgagcgcggacgtgctcggccggcgccgtaccgtcacgctgcgc
aaggagcccgagcgcccggccgccggccggtccgccaagccgcggggcgccgccactgtg
gtcgccgacctctcccccgccgccgcgcccgtcttcgagcggctccgcgcgtggcgcgcg
gccaccgccaaggagcagggcgtcccggcgtacgtcatcttccacgacgcgaccctgcgg
cagatcgccgccgagccgcccacctccctcgccgagttgtcccggttcaacggggtcggc
gagaacaagctcgccaagtacggcgaggcgatcctggccgtcctcgccgagtcctga
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