Mesocricetus auratus (golden hamster): 101823166
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Entry
101823166 CDS
T08306
Symbol
Cic
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101823166 (Cic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maua03000
]
101823166 (Cic)
Transcription factors [BR:
maua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101823166 (Cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
101823166
NCBI-ProteinID:
XP_012981437
UniProt:
A0A1U8CPR0
LinkDB
All DBs
Position
Unknown
AA seq
2499 aa
AA seq
DB search
MKPMKKVCPGLAGSASGSKSPPATRAKALRRRGAGEGDEGPQPQEQTGPEEAEEGEEEET
ERDPGAEGPPPELQPNDPTPGLADDPKGDGEAGRWEPSLSRKTATFKSRAPKKKYVEEHS
AGSGGVGGPPEERERTPEDAGALGVPPRPPASARSSSTDTASEHSADLEDEPTEACGPGP
WPSGAPSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRALTFYEGVS
GGGVDVVLDATPPPGALMVGTAVCTCVEPGMAAYREGVVVEVTAKPAAYKVLLSPGPGSH
PGPPGTPPPAQPLHREPQEAVWVTRSSLRLLRPPWEPEVSLRKHPAGPEEEQAEPGVTLP
PCPSSLEPKQPEDAEVSNISFGSNLGTRCEEGEEKHQPTLGTPVLLPLPPPQLLSPPPKS
PAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTAAQQKYKKGDVVC
TPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADGGPGGTGRPAG
VAAREGSAEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVMLVSLGS
SRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSRHLSASTP
KAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPVSPGRRKTELLPHPGTLGAS
GAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLLLLPPP
AGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTAGEARAGGPGRGCRETPV
PPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTLGLASSPFQPVAFHPSPAALLPV
LVPSSYPSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQ
QPASHPVASNQSKEPAESAAVAHEQPPGGAGSADPGRPPGATCPESPGPGPPLTVGGVDP
GKSLPPTTEEEAPGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPK
ERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWY
ALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERS
MSDTGTAAAPGVSSELLSAAAQTLLTADAKAPGSGPCGAERLHTVGGPGSARPRAFSHSG
VHSLDGGEADSQALQELTQMVSGPASYSGPKPSPQYGAPGTFATPGEGGTLATSGRPPLL
PSRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDSFGTTDIDLKCKERVTDSESGDS
SGEDPESKGFGRKVFSPVIRSSFTHCRPALDPEPPGPPDPPAAFSKGCGPSSSSPASSSA
SASFSLGSGTFKTQESGQGSTAVPLRPPPPGAGGPTPPSKATRFLPADPATFRRKRPESV
GSLEAPGPSVIAAPPSAGGNVLQTLVLPPNKEEREGSGPRVPSAPAPSLAYGAPAAPLPR
PAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASSNDTVGARTEMGAGSRVPGGSPLGVS
LVYSDKKSAAAASAAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPATSAVQFIAQGAP
GSATPAGSGASAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPAP
GTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTAGIPILQSVPPAPPPKAQSVSPV
QATPSGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSSPFSVPVQNGAQQPSKIIQL
TPVPVSTPSGLVPPLSPATMPGPTSQPQKVLLPSSTRITYVQSAGGHTLPLGTSPACSQA
GTVTSHGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSPQLPPACTAP
GGPVIAAFYPGSPAPTSAPLGPPPQASPSLVYTVATSTTPPAAAILPKGPPASVTPAPTS
PFPSATGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFESGATGRPGPTPRQSLDSG
AAREPAAPESELEGQPTPPVPPPPPESWPPAARSSPPPPLPAEERPGAKGPETASKFPSS
SSDWRVPGLGLESRGEPPTPPSPAPAAATVPSGSGSGSSEGGGGRAAGDTPERKDVPSSG
KKVKVRPPPLKKTFDSVDKVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGS
YRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTEAEDV
LGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQL
KIREVRQKIMQAATPTEQPPGAEAPLPGPPPAGMAATPVPTPSPAGGPDPTSPGSDSGTA
QTAPPLPPPPEPGPGQPGWEGAPQPSPPPSGPSTAATGR
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaagtgtgtcctggccttgcaggttccgccagcggcagcaagtcc
ccaccagctaccagggccaaggctttgaggcggcgaggggccggggagggtgatgaggga
ccgcagccacaggagcagacagggccagaagaggctgaagaaggcgaggaagaggagact
gagcgggaccctggagctgaggggccacctccagagctgcagcccaatgaccctactcca
ggcctagctgacgaccccaagggagacggggaggcaggccgctgggagccttcactgagt
cgcaagacagccacgttcaagtctcgagccccgaagaagaagtatgtggaggaacacagt
gcgggaagcggtggtgtgggcgggccccctgaagagcgagagcggacccccgaggacgct
ggtgccctgggggtacctccacggccacctgcctccgcccggtcctcctccactgacaca
gccagtgagcactcggctgacctggaggacgagccgactgaggcctgtgggccaggcccc
tggccctctggagctcccagtggtggctacgaccttcggcagctaaggtctcagcgggtg
ctggctcggcgtggtgatggcctcttcctgcctgctgtcgtacgccaggtgcgccgtagc
caggacctgggtgtgcagttccccggggaccgggccttgactttctacgaaggggtatca
ggtggtggggtggatgtggttttggatgccacgccacccccaggtgcactgatggtgggc
acggctgtgtgtacctgtgtggaacctggcatggctgcctaccgggagggtgtagtggtg
gaagtgaccgctaagccagctgcctataaggtcctcctcagcccaggccccggctcccac
ccgggcccaccaggtactccgccaccagcccagccgctgcaccgtgagccccaggaggct
gtgtgggtcacccgctccagcctgcgcctgcttcggcccccctgggaacctgaggtctcg
ctgaggaagcacccagcaggccccgaggaagagcaggccgagcccggggtcactttgcct
ccttgcccttcctccttggagcccaagcagccggaggacgctgaggtctccaacatcagc
tttggtagcaacctggggactcgctgtgaggagggtgaggagaaacaccagccaaccctg
ggcaccccagtcttgctcccactgcctccgccccagctcctgtcaccgcccccgaaatcc
ccagcctttgctggcccgggtcgccctggtgagcagccttcgccctgccaggaagggagc
cagggtggcagccggagcagcagcgtggcctctctggagaagggagctgcaccggcggcc
cgtgcccgcacaccattgacagccgctcagcagaagtacaagaagggagatgtggtctgc
acgcccaatggcatccggaagaagttcaatggcaagcagtggcgccggctctgctctcgg
gatggctgcatgaaggagtcccaacggcgcggctactgctcccgccacctttccatgaga
accaaagagatggagggcctggcagacggcgggccaggtgggaccgggcggcctgccggg
gtggcagcccgtgagggaagcgcagagtttgactggggtgatgagacttcgagggacagt
gaggccagcagtgtggcagcccgcggagactcccgcccccgcctggtcgctcctgctgac
ctgtcacgctttgaatttgacgagtgtgaggcggctgtgatgctggtgtccctgggcagc
tcccgctcgggcacgccttccttctcgccggtctccacacagtcgcccttctcgcccgct
ccctcgccctcaccctcacccctcttcggctttcgccctgccaacttcagccccataaat
gcctcgcctgtcatccaacgcaccgctgtccgcagccgccacctgagcgccagcacccct
aaggcaggtgtgctgacaccaccggacctgggcccccatcccccgccacctgcccctcga
gagcgccattcctccggcatcctgcccactttccagaccaacctcaccttcactgtgccc
gttagccctggccgaaggaagacagaactgttgccccacccggggaccttgggggcctcc
ggggcaggaggtggaggagctgccccagacttccccaagagtgacagcttagactccgga
gtggactcggtgtcccatacacctaccccgtccacgccagctggcttccgggccgtgtca
cctgctgtgcccttctcccgctcccgccagccttcgccactgctgctgttgcccccaccc
gcgggactcacctcagacccaggcccttctgtgcgaagggtgcctgccgtgcagagggac
tcacctgtcatcgtccgcaaccctgatgtgccactgccctccaaattccctggagaggtg
ggcactgccggtgaggcacgggccgggggacctgggcggggttgccgtgagaccccagtg
ccccctggggtggccagcgggaagcctggcctgcctccgcctctgcctgctccagtgccc
atcactgtgcctccagccgcgccgactgctgtggcccagccaatgcccaccctgggcctg
gcctcgtcacccttccagcccgtggcctttcacccttcacctgccgccctgttgccagtt
ctagtgcccagcagctatcccagccaccctgcccccaagaaggaagtcatcatgggcagg
cctggaacagtgtggacaaatgtggaacctcgttctgtggctgtgttcccctggcactcc
ttagtccccttcctggcacccagccagccagacccctctgtgcagcctagtgaagcccag
caacctgccagccaccctgtggcctccaaccagagcaaagaacctgctgaatcggctgct
gttgctcatgagcaaccgccaggaggggcggggagtgctgaccctgggcgaccccctgga
gccacatgccctgagagccccgggcctggacctccactcactgtggggggtgtggaccct
ggtaaaagtcttcctcccaccactgaggaggaggcccccggccccccaggagagtcccgg
ctggacagcgagacagagagtgaccatgatgatgccttcctctccatcatgtctcccgag
atccagctgcctctgccacctgggaagcgccggacccagtccctgagtgccctgcccaag
gaacgagactcgtcttctgagaaggatggacggagtcctaacaagcgggagaaggaccat
atccgtcggcccatgaacgccttcatgatcttcagcaagcggcaccgggccttggtccac
caacggcaccccaaccaggacaaccggactgtcagcaagatcctgggagagtggtggtat
gccctggggcccaaggagaaacagaaataccacgatctggccttccaggtgaaagaggcc
cacttcaaggcccacccagactggaagtggtgcaacaaggaccgaaagaagtccagctca
gaggccaagcccacgagcctggggctggcaggagggcacaaggagacgcgggaacggagc
atgtcggacacgggaactgctgctgcccctggggtgtcttctgagctcctgtccgctgca
gcccagacactcctgaccgcggatgccaaggctccagggagtggcccctgtggagcagag
cgactacacacagttgggggacctggctcagctcggcccagagccttctctcacagtggg
gtgcacagtcttgatggtggggaagcagacagccaagcactacaggagctgacccagatg
gtttctggccctgcatcatactccggtccaaagccgtccccccagtatggcgctccaggg
acttttgcaactcctggtgaaggaggtaccttggccaccagtgggcggcccccactgctg
ccctcccgagcctctcgttcccagcgtgcagccagtgaggacatgaccagtgacgaggag
cgcatggtcatctgtgaggaagaaggcgatgatgatgtcatcgctgatgacagctttggc
accactgacattgatctcaagtgcaaggagcgggtgactgacagtgagagcggggacagc
tctggggaggacccagagagcaagggctttggccggaaggtgttttcgcctgtcatccgc
tcctcttttacccattgccgtccagccctggaccctgagcctccgggacccccggatccg
cctgcggccttcagcaaaggctgtggtccctcctcctcctcgcctgcttccagctcagcc
tcagcctccttttccctgggctctgggacctttaaaacccaggagtctggccagggcagc
acagcggtcccgctgcggcccccgcctcctggagctgggggcccaaccccaccttccaaa
gccactcggtttcttcctgcggatcctgccaccttccggcgcaagaggcctgaaagtgtc
gggagcctggaggcgccgggcccctcagtcattgctgcgcctcccagtgcaggaggaaac
gttctgcagacactggttctgcctcccaacaaggaagagcgggagggcagcggtccgcgg
gtaccctcagccccagccccatcactggcttatggggctccagcagctcctctgccccgc
ccagctgccaccatggtcaccaatgtggtacggcctgtcagcagcacgcctgtgcccatt
gcctctaagcctttccccacctctggccgggctgaggcatcttcaaatgacacagtaggt
gcccggactgaaatgggcgctgggtctcgggtgcctgggggctccccactgggtgtcagc
ttagtgtactcagataagaagtcggcagcggccgcctcagcagctccacacttggtagct
ggacccctcttgggcaccgtggggaaggccccggctactgtcaccaacctgctggtgggc
accccaggctacggggctcctgcgacatctgccgttcagtttatcgcccagggagcccca
ggcagtgcgacccctgcaggatcaggagcaagtgccgggagtggccccaatgggccagtt
cccctgggcatcctgcagccaggtgccctaggcaaggctggggggatcacccaggtgcag
tacatcctgcccacactgccccagcagcttcaagtggctcctgcgcctgcgccagcgcct
gggaccaaggcggcagctcccggtgggccagcacctaccaccagcatccgtttcaccctc
cccccgggcacctcgaccaacggcaaggtcctggctgctacggcacccactgctggcatc
cctatcctgcagtctgtacctcctgccccgccccctaaagcccagtcagtttctcctgtc
caggccacaccttctggtggctcagcccagctgcttcctgggaaggtgctagttcccctg
gctgcccctagcatgtcagtccgaggtggaggggccggccagccactgcccctggttagc
tcgcctttctcagttcctgtccaaaatggtgcccagcaacctagcaagattatccagctg
actcccgtgcctgtgagcacaccgagcggtctagtgccgcccctgagcccagccacaatg
ccgggacccacatcccagcctcagaaggtcctgttaccctcttccacaagaatcacttac
gtgcagtcagcaggcgggcacaccctgcctctgggtaccagccctgcctgcagtcaggct
gggacagtgacctcacacgggcccaccagctctgtcgctctgggcttcacgtcgctgggg
cccagtggccccgccttcgtacagcccctgctctcaggccaagctccattactggctccc
ggccaggtgggcgtgtcacctgtgcctagcccccagttgcctccagcctgcacagcccct
ggaggccctgtcatagcagcgttttaccctggcagccctgcgcccacctcagcgcccctg
ggcccgcctccccaagcctccccaagcctggtgtacacggtggccaccagcaccacccca
cctgctgccgccattctgcccaagggcccaccagcctctgtcactccagcccccactagt
cccttccccagtgccacaggctccatgacctacagcttagtggctcccaaggctcagcgg
cccagcccaaaggccccccagaaggtgaaggcagccatcgccagcattcctgtggggtct
tttgagtcaggcgccactgggcggcctggacctacaccccgacagtctctggactctggt
gcagcccgagagccagctgccccagaatcagagcttgaggggcagcccacacccccagtg
cccccaccccccccagagtcctggcctcctgctgcccggagcagccccccaccgcccctg
cctgctgaggagcgacctggcgccaaaggccccgagactgccagcaaattccccagctca
tcttcagactggcgagtccctgggctgggcctggagagtcgtggggagcctcccacgcct
cccagcccagcgcctgctgcagccactgtccctagtggaagcggcagtggcagcagcgag
ggcggtggcgggagggcggccggggacacacctgagcgcaaagacgtgcctagttctggg
aagaaggtgaaggtgcggcccccgcccctgaagaagacctttgactctgtggacaaggtc
ctgtcagaagtggactttgaagagcggtttgctgagctacctgagtttcggccagaggag
gtgctgccctcacccaccctgcagtctctggccacctcgcctcgggccatccttggctcc
taccgcaagaagaggaagaattccactgacctggactcggcgcctgaggaccccacctcg
cccaagcgcaagatgaggagacgctcgagctgcagctcagagcccaacaccccgaagagt
gccaagtgcgagggtgacatcttcacctttgaccgcacaggtactgaagccgaggacgtg
cttggggagctggagtacgagaaagtgccctactcttcactgcggcgcaccctggaccaa
cgcagggccctggtcatgcagctcttccaggaccatggctttttcccgtcagcccaggcc
acagcagccttccaagcccgctatgcagacatcttcccatccaaggtgtgtctgcagttg
aagatccgagaggttcgccagaagatcatgcaggcagccactcccacggagcagccccct
ggggctgaggcccccctccctggaccacccccagctggcatggctgctactcctgtcccc
actcccagccctgctgggggtcctgatcccacctctccaggctcggactctggcactgcc
caaactgccccgccactgcctccgcccccagagcctgggcctgggcagcctggctgggag
ggggctccccagccctccccacctccctctggcccctccacagctgccacaggcaggtga
DBGET
integrated database retrieval system
