Mesocricetus auratus (golden hamster): 101823365
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Entry
101823365 CDS
T08306
Symbol
Prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101823365 (Prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101823365 (Prpf40a)
Spliceosome [BR:
maua03041
]
Complex A
U1 snRNP components
U1 related factors
101823365 (Prpf40a)
Complex B
101823365 (Prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
101823365
NCBI-ProteinID:
XP_005069024
UniProt:
A0A1U7QM45
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MQATPSEAEAGGESAPSCVSVARSDWTAGKPVSLLAPLLPPRSSGQPLPFGPGGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESQPPSRGPGDGERRLSGSNLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMSGMMMSHMSQASMQPALPPGVNSMDVAAGAASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGGLITKSNLHAMIKAEESSKQEECTTASTAPVPATEIPTTMSTMAAAEAAAAVV
AAAAAAAAAANANTSTTPTNTVGSVPVAPEPEVTSIVATVVDNENTVTISNEEQAQIANA
TAIQDLSGDISSNTGEEPTKQETVTDFTPKKEEEENQPAKKTYTWNTKEEAKQAFKELLK
EKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKE
SFQRFLENHEKMTSTTRYKKAEQVFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQ
LRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHI
RALEKEEEEEKQKTLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIR
FTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISS
TKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDA
VWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKR
SRSRSGSDSDDDDSHSKKKRQRSESHSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDS
PESDTEREKDKKDKDRESEKDRSRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKR
RRTLLEQLDDDQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagcgaggcggaggctgggggcgaatcggcgccgagctgcgtgtcc
gtcgcgcgctctgattggacagctgggaagcctgtcagtttattggccccgctgctcccg
ccccgtagctcagggcagcctttaccctttggccccggcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccgacggagcagtctgagcccgacgatg
aggccggggactggagccgagcgtggaggcctcatggtgagtgaaatggagagccaacct
ccctcgcggggtcccggggacggggagcggagattgtccggctcaaacctgtgctccagt
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcatcctggcatg
cattatgcaccaatgggaatgcacccaatgggtcagagagcaaacatgcctcctgtacct
catggaatgatgccacagatgatgccccctatggggggacctccaatgggacaaatgcct
ggaatgatgtcttcagtaatgtcaggaatgatgatgtctcatatgtctcaggcgtccatg
caacctgccttaccgcctggagtaaatagtatggatgtagcagcaggtgcagcatctggt
gcaaaatcaatgtggactgaacataaatcacctgatggaaggacttactattataatact
gaaacaaaacagtctacctgggaaaaaccagatgatcttaaaacacctgctgagcaactc
ttgtctaaatgcccatggaaagagtacaaatctgattctgggaagccttattactataat
tctcaaacgaaagagtcccgctgggccaaacccaaggaacttgaggatcttgaaggatac
cagaataccattgttgctggaggtcttattacaaaatcaaacctgcatgctatgatcaaa
gctgaggaaagcagcaagcaagaagaatgtactacagcatcaacagccccagttcctgca
acagaaattcctaccactatgagcaccatggctgcggcagaagcagcggctgctgttgtt
gcagctgctgcagctgccgcagcagctgctaatgccaatacttccactactcctactaat
actgtgggaagtgttcccgttgctcctgagcctgaagttacttccattgttgctactgtt
gtagataatgaaaatacagtaactatatccaatgaagaacaagcacaaattgctaatgcc
acagctattcaagatctaagtggtgacatatctagtaacactggagaggaaccaactaaa
caagaaactgtaaccgattttactcctaaaaaagaagaggaagaaaaccaaccagcaaaa
aaaacatatacttggaatacaaaggaggaagcaaagcaagcatttaaagaattattgaaa
gaaaagcgggtaccctccaatgcttcatgggagcaagctatgaaaatgattattaatgat
cctcggtacagtgctttagcaaagctaagtgagaaaaagcaggcctttaatgcctataaa
gtccagactgagaaagaggaaaaagaagaagcaagatcaaaatacaaagaagctaaggaa
tcctttcagcgttttcttgagaatcacgagaaaatgacttccacaaccagatacaaaaaa
gctgaacaagtgtttggggagatggaagtttggaatgctatatcagagcgtgatcgtctt
gaaatctatgaagatgttttgttcttcctttcaaaaaaagaaaaggaacaagcaaagcag
ttacgaaagagaaattgggaagccttaaaaaacatacttgacaatatggctaatgttaca
tactctactacttggtctgaagcccaacagtatctaatggataatccaacgtttgcagag
gatgaagagttacagaacatggataaagaagatgcattaatatgctttgaggaacatatc
cgggctttagaaaaggaagaggaagaagaaaaacagaagactttattgagagaaaggaga
cggcagcgtaaaaatagggaatcttttcagatatttttagatgaattgcatgagcatgga
caactacattctatgtcctcttggatggaactgtatccaactattagttctgatattagg
ttcactaatatgcttggtcagccgggatcaactgcacttgatcttttcaagttttatgtt
gaagatcttaaagcacgttatcatgatgaaaagaagataataaaagacattctgaaggat
aaaggatttgtagttgaagtaaatactacctttgaagattttgtcgcaataatcagttca
acaaaaagatcaactactttggatgctggaaatatcaagttggctttcaatagtttacta
gaaaaggcagaagcccgggaacgtgaaagagaaaaggaggaagctcggaaaatgaaaaga
aaagagtctgcatttaagagtatgttgaaacaagctgctcctccaatagagctggatgct
gtctgggaagatatccgggagaggtttgtaaaagaaccagcatttgaggatataactcta
gaatctgaaagaaaaagaatatttaaagatttcatgcatgtgcttgagcatgaatgtcaa
catcatcattcaaagaacaagaagcattctaagaaatctaaaaaacaccataggaaacgc
tcccgctctcgatcgggttcagattcagatgatgatgacagccattcaaagaaaaaaaga
cagcgatcagagtcacattctgcatcagaacattcttctagtgctgaatctgagagaagt
tataagaaatcaaaaaaacataagaagaaaagcaaaaagaggagacataaatctgactct
ccagaatcagatactgaacgagagaaggataaaaaagataaagatcgggaaagtgaaaaa
gacagaagtagacagagatcagagtcaaaacacaaatcacctaagaaaaagactggaaag
gactctggtaactgggacacttctggcagtgaactgagtgaaggggaattagaaaagcgc
agaagaacccttttggagcaactggatgatgatcaataa
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