Mesocricetus auratus (golden hamster): 101824355
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Entry
101824355 CDS
T08306
Symbol
Tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X2
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101824355 (Tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maua04131
]
101824355 (Tgfbrap1)
Membrane trafficking [BR:
maua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101824355 (Tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
101824355
NCBI-ProteinID:
XP_005075415
UniProt:
A0A1U7QV69
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MMNIKAFTLVSAVERELLTGDKEHISIECVECCGRNLYVGTNDCFIYHFLLEEKAMPTGT
TSFTATKQLHRHLGFKKPVNELCAASALNRLLVLCDNSITLVNMLNLEPVPSGARIKGAT
TFAVNENPVNGDPFCVEVCIISVKRRTVQMFLVYEDRVQIVKEVSTPEQPLAVAVDGYFL
CLALTTQYIILNYSTGLSQDLFPYCSEEKPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSSQLDVRELISLYPFLLPTSSSFTRCHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
AWLEKHKKYFALGLLYHYNKQDASAVQLWVNIVNGDIQDSTRSDLYEYIVDFLTYCLDQE
LVWAHADWLLQKSEEIGVQVFTKRPLDEQQQTSFNPDDIIRCLKKYPKALVKYLEHLVID
RRLQKEEYHTHLATLYLEEVLRQRVATDSKDIEATETQVKLRRLLQKSDSYRVHLLKEKI
QDAGLPMESAILHGKLGEHEKALHILVHEMGDFSAAEDYCLWGSEGQDTACRQHLFHTLL
AMYLRAGPSAHELTVAAVDLLNHHAREFDATQVLQLLPDTWSVQLLCPFLTGAMRDSIHA
RRTTQVALGLAKSENLIYMYDKMKLKGSAVRLSEKKLCQLCQNPFGEPVFVRYPNGGLVH
THCAASRHTTPSSPSPGTRT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacatcaaggccttcaccttggtctctgcagtggagcgggagctgctgacaggt
gacaaggagcacatcagcatcgagtgtgtggagtgctgtggcaggaatctctacgtcggt
accaatgactgcttcatttaccacttcctgttggaggagaaggccatgcctaccgggacg
acctcgttcactgccaccaagcagctgcacagacacctgggcttcaagaagccagtgaac
gagttgtgtgcggcctcagctctcaataggcttctggtgctctgcgacaactccataacc
ctggttaacatgctgaacctggagccagtcccctcgggagcccgcatcaagggggctaca
acatttgcagtgaacgagaaccctgtgaatggggaccctttctgcgtggaagtgtgcatc
atctctgtgaagcgccggaccgtccaaatgtttctggtgtatgaggaccgagtacagatt
gtcaaggaagtatctactccagagcagcctcttgctgtggctgtggatggctacttcttg
tgcctggccctgaccacccagtacatcatcctgaactacagcacaggcctttcccaggac
ctgtttccctactgcagtgaggagaagccacccattgtcaagaggataggcagacaggag
ttcctgctggctggccccggaggcctgggcatgtttgccactgtggccgggatttcccag
cgtgctcctgtgcactggtcagagaatgtgattggggcagctgtttgcttcccctatgtc
atagcactggatgacgaattcatcacggttcacagcatgctggatcagcagcagaaacag
accctgccctttaaggaaggtcacatcctgcaggactttgaaggaagagtgattgttgcc
acaagtaaaggagtttacatcttggttccattacctctggaaaaacaaatacaggatctg
ttagcaagccggagagtggaggaggctttggttttagcaaaaggagcccggaggaacatt
ccaaaagagaaatttcaggtaatgtacaggcggattctgcagcaggcaggctttatacag
tttgcacaactccagttcctggaagccaaagagctcttcagaagcagccagctggatgtc
cgggagctgatctctctctaccccttcctgttgcccacctcctcctccttcacccggtgc
caccctcctcttcacgagtatgcagacctgaaccaactgacccaaggcgatcaggagaag
atggccaagtgcaagcgcttcctcatgagctacctgaatgaagtccgcagcacagaggta
gcaaatggctacaaggaagacatcgacacggccctgctcaagctgtatgcagaggctgac
cacgacagcctactggacctcttggtcactgagaacttctgcctgctgaccgacagtgct
gcctggctggagaagcacaaaaagtattttgcactaggactgctctatcattacaataaa
caagatgcctctgcagttcagttgtgggtgaacattgtgaatggggacatccaggactcc
acacgctcagacctgtatgaatacatcgttgattttcttacctactgcttagaccaagag
ctggtgtgggcccatgctgactggctgttgcagaaaagtgaggagattggagttcaagtt
ttcaccaagagacccctggatgagcagcaacaaactagttttaatccagatgacattatt
cgttgccttaagaaataccctaaagccctggttaaatatctggagcatcttgtcatcgac
aggagactgcagaaagaggagtaccacacccacctcgccaccctctacctggaagaagtg
ctgcggcagagggtagccactgacagcaaggacatagaagccactgagacacaggtcaaa
ctccggaggctgctccagaagtctgactcataccgtgtccacttgttgaaagagaagatc
caggacgctggcctgcccatggagagcgccatcctccacgggaagctgggcgagcacgag
aaggccctgcatatcctggtgcatgagatgggggacttctctgcagctgaggactactgc
ctctggggctctgagggtcaggacacagcctgccgtcagcaccttttccacacactgctc
gccatgtacctccgcgcaggcccctctgcccacgagctgactgtggctgctgtggacttg
ctgaaccatcacgccagggaatttgatgccacccaggtcctgcagctgctgcctgacacc
tggtcagtgcagcttctctgcccgttcctcacaggggctatgagggacagcatccatgcc
aggaggaccacacaggtggctcttggcctggccaagtcagaaaacctgatttacatgtat
gataagatgaagctaaagggaagtgcagtccggctctcagaaaaaaagctttgccagctc
tgccagaaccctttcggtgagcctgtgtttgtcagatacccaaatggagggctcgtgcac
acccactgtgctgccagcagacacacgacccccagctcacccagccctggcactcggact
tga
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