Mesocricetus auratus (golden hamster): 101824804
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Entry
101824804 CDS
T08306
Symbol
Trpc4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04360
Axon guidance
maua04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101824804 (Trpc4)
09158 Development and regeneration
04360 Axon guidance
101824804 (Trpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maua04040
]
101824804 (Trpc4)
Ion channels [BR:
maua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101824804 (Trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101824804
NCBI-ProteinID:
XP_012974115
UniProt:
A0A1U8C6S6
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLVKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIREAKTEEGLTEENVKELKQDISSFRFEVLGLLRGSKLSTIQSANAASPADSDEKSHSE
GNSKDKKKNLSLFDLTTLIHPRSAAIASERHNISNGSALVVQEPPREKQRKVNFVADIKN
FGLFHRRSKQNAAEQNANQIFSVSEEITRQQAAGPLERNIQLESQGLASRGDLSIPGLNE
QCVLVDHRERNTDTLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAQEEDSSIDYDLSPT
DTTAHEDYVTTRL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgtcaacgccccctacagagaccgcatccccctg
aggattgtcagagcagagtctgaactctcaccatcagaaaaagcctacttgaatgcagtg
gaaaagggggactatgcaagtgtcaagaaatcgcttgaggaagcagagatttattttaag
atcaacatcaactgcattgacccccttggaaggactgctcttctcatcgccattgaaaat
gagaacctggagctgattgaactactgctaagtttcaacgtctatgttggtgatgcgctg
cttcatgccatcagaaaggaggtggttggagctgtggagctgctgctgaaccacaaaaag
ccaagtggagagaagcaggtgcctcccattctcctcgataagcagttctctgaattcact
ccagacattacacctatcatcttggccgcacatacaaataattatgagataatcaaactt
ctggtccagaaaggtgtctcggtgcccaggccccacgaggtccgctgtaactgcgtcgag
tgtgtctccagctcagacgtcgacagcctcaggcactcacggtccaggctcaatatctac
aaggcgctggccagtccctcgctgatcgccctgtcgagcgaagaccctttccttaccgcc
tttcagctaagctgggagctgcaggaactgagcaaggtagagaatgaattcaagtcggaa
tatgaggagttgtctagacagtgcaaacaatttgctaaggacctcctggatcagacacgg
agttccagagagctggaaatcattcttaattaccgcgatgacaatagtctgatcgaagaa
cagagtggaaacgatcttgcgaggctaaaattagccattaagtaccgtcaaaaagagttt
gttgcccagcccaactgccagcaactgctcgcatcccgctggtacgatgagttcccaggc
tggaggagaagacactgggccgtgaagatggtgacatgtttcataataggactgcttttc
cccgtcttctccgtgtgctacctgatagctcccaaaagcccacttggactgttcatcaga
aagccatttatcaagtttatctgccacacagcctcctatttgacatttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacagacaaggtccaccaccaacc
atcgtggagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacag
atgtgggacggtggacttcaggattacatccacgactggtggaatctaatggacttcgtg
atgaactccttgtatttggcaacaatctccttaaagatcgtcgcatttgtaaagtacagt
gctctgaacccacgggaatcatgggacatgtggcacccgaccctggtggcagaggctttg
tttgctattgcaaacatcttcagttccctgcgcctgatctcactgttcactgcaaactct
cacctggggcccctgcagatatctctgggaagaatgcttctggacatcctgaaattcctg
ttcatatactgcctcgtgctgctagcatttgcaaatggcctgaatcaactctacttctac
tacgaagaaacaaaggggttaagctgcaaaggcatacgctgtgagaaacagaataatgcg
ttttccacgttatttgaaactttacaatccctgttttggtcaatatttggactcatcaat
ttatatgttaccaatgtcaaagcccagcacgagttcaccgagtttgttggcgctaccatg
tttgggacatataatgtcatctccctggttgtcctattgaacatgttaattgcaatgatg
aataattcttaccaactgattgccgaccatgcagatatagaatggaaatttgctcgaaca
aagctttggatgagctactttgaagaaggaggcaccctgcctacacctttcaatgtcatc
ccaagccctaaatccctgtggtacctggtcaagtggatatggacacatctgtgtaagaaa
aagatgagaaggaagccagaaagcttcgggacgattgggcggcgagcggctgacaacctg
aggagacaccaccaatatcaagaggtcatgaggaacctggtgaaacgctacgtggcagcc
atgatcagagaggcaaagacagaggaaggcctgactgaggagaatgtcaaggaactaaaa
caagacatttctagcttccgctttgaagtcctgggattgctccgaggaagcaagctctcc
acaatacagtcagccaacgcggcgagtccggcagactccgacgaaaagagccatagcgaa
ggtaatagcaaggacaagaaaaagaatctcagcctctttgatttaaccactctgatccac
ccgaggtcagcagccattgcctccgagagacataacataagcaatggttccgccctggtg
gtgcaggagccacccagggagaagcagagaaaagtgaattttgtggctgatatcaaaaac
ttcgggttatttcatagacggtcaaaacaaaatgctgctgagcaaaacgcaaaccaaatc
ttctctgtttcagaagaaattactcgtcaacaggcggcaggaccacttgagagaaatatc
caactggaatcccaaggattagcttcacggggtgacctcagcattcctggtctcaatgaa
cagtgtgtactagtagaccatagagaaaggaatacggacactttgggtttacaggtaggc
aagagagtgtgctccttcaagtcagagaaggtggtggtggaagacactgtccctatcata
ccaaaggagaagcatgcccaagaggaggactcaagcatagactatgatttaagccccacg
gacacaacagcccatgaagattatgtgaccacaagattgtga
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