Mesocricetus auratus (golden hamster): 101825076
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Entry
101825076 CDS
T08306
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101825076 (Ddx1)
03016 Transfer RNA biogenesis [BR:
maua03016
]
101825076 (Ddx1)
Enzymes [BR:
maua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101825076 (Ddx1)
Spliceosome [BR:
maua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101825076 (Ddx1)
Transfer RNA biogenesis [BR:
maua03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101825076 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
101825076
NCBI-ProteinID:
XP_040586687
UniProt:
A0ABM2W6V1
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGLLKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVGLSKAPDSYIVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHGQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggcttctgccaactgatatccaggccgaatctatcccattgatcctaggaggaggt
gatgtacttatggcagcagaaacaggaagtggaaaaactggtgcctttagtattccagtt
atccagattgtgtacgagaccctgaaagaccagcaggaaggaaagaaagggaaaactact
atcaaaactggtgcttcggtgctcaacaaatggcagatgaatccatatgacagagggtct
gcttttgcaattgggtcggatggcctgtgttgtcagagcagagaagtgaaagaatggcat
gggtgcagagccactagaggattgctgaaaggaaaacactactatgaggtatcctgtcat
gaccaagggctgtgcagagttgggtggtctaccatgcaggcctccttagacctaggtact
gacaagtttggatttggcttcggtggaacaggaaagaaatcccacaataaacagttcgat
aattacggagaggaattcactatgcacgataccattggctgctacttagatattgataaa
gggcatgtgaagttctctaagaatggaaaagaccttggtctggcatttgaaataccagca
catatcaaaaaccaagccctcttccctgcctgtgttttgaagaatgctgaattgaaattt
aactttggtgaagaagaatttaagtttccaccaaaagacggttttgttggtctctccaag
gccccagatagttacattgtcaagtcgcagcacacaggtaatgcacaggtgtcacaaaca
aaatttctccctaatgctccaaaagctctcattgtggagccctcacgggagttagctgaa
caaaccctgaacaacgtcaagcagtttaagaagtatattgataaccctaagttacgggag
cttctcataattggaggtgttgcagctcgggatcagctgtctgttttggataatggggtt
gatattgttgtcggtactccaggaagattagatgatttggtatcaactggaaagctcaac
ttgtctcaagttagattcttggttctggatgaagcagatgggcttctctctcaaggttat
tctgactttatcaacaggatgcatggtcagattcctcagattacttctgatgggaaaaga
cttcaggtgattgtttgctctgctactttgcactctttcgatgtaaagaaactctctgag
aagataatgcattttcccacgtgggtcgatttgaaaggggaagattctgttccagatact
gtacaccacgtcgttgtccctgtaaatccgaaaactgacaagctctgggaacggcttgga
aagaaccacattcgaactgatgatgtacacgcaaaagataacacaagacctggtgctaac
agtccagagatgtggtctgaagctattaaaatacttaagggggagtatgctgtccgagca
atcaaggagcacaagatggatcaagcaattatcttctgtagaactaaaattgactgtgat
aacttggagcagtactttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcatgtgtgtgtcttcacggtgacagaaagcctcatgagagaaaacaaaacttggaaaga
tttaagaaaggagacgtaagattcttgatttgcacagatgtagctgctagaggaattgat
atccacggtgttccatatgttataaatgtcaccctgcctgatgagaagcagaactacgtg
caccggattggcagagtggggcgagctgaaaggatgggcctggccatttccctggtggca
acagaaaaagaaaaggtttggtatcatgtgtgcagcagccgtgggaaaggatgctataac
acgaggctcaaggaagatggcggctgtaccatctggtacaatgaaatgcagctgctttcc
gagatagaagaacacctgaactgcaccatttcccaggttgagccagatataaaggttcca
gtggatgagtttgatgggaaagttacatatgggcaaaagagggctgctggcggtggaaac
tataaaggccatgtggatatcttggcacctaccgttcaggagttggccgcccttgaaaag
gaagcacagacatctttcctgcaccttggctaccttcccaaccagctgttcagaaccttc
tga
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