Mesocricetus auratus (golden hamster): 101825611
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Entry
101825611 CDS
T08306
Symbol
Ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04612
Antigen processing and presentation
maua05145
Toxoplasmosis
maua05152
Tuberculosis
maua05164
Influenza A
maua05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
101825611 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101825611 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
101825611 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
101825611 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
101825611 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
maua01001
]
101825611 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maua04054
]
101825611 (Ciita)
Enzymes [BR:
maua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101825611 (Ciita)
Protein kinases [BR:
maua01001
]
Serine/threonine kinases: Other
TAF1 family
101825611 (Ciita)
Pattern recognition receptors [BR:
maua04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101825611 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_14
LRR_4
LRR_8
AAA_16
Motif
Other DBs
NCBI-GeneID:
101825611
NCBI-ProteinID:
XP_021091249
UniProt:
A0A3Q0DFR3
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MNHFQAILAQVRTLLSSQQPRQVQALLDGLLEEELLSREYHCALLHEPDGEALARKISLT
LLEKEDLGLAYSSWVCSRLQAPTVERATSYRDHGGHSLCATMELGLPEGSYLELLNSNVD
PLHLYHLSDNMDLPGEEETQLSSEPDTDTINCDQVSKLLQYMEGDEETPEAYANIAELDQ
YVFQDTQLEGHSKDLFIERIETEEGFSESMEVPVEAGERSQKRRSPEEHPMDPKHRKLAE
PSMVPMLTGSFLMGPASISTMPYLPPALSNQEPVSCHIHLEGATQTSVPPSRSSPNCLDL
TIGHIQLLPTLPQGLWQIQGAGTGLPSVLIYHGEMPQVNHVIPSGSPTVSSLPKSPDRPC
STSPFAPSVADLPSMPEPALTSRVNEAEDTTSPSPCQEGPESPIKLPKWPASVERFQHSL
KDKYQVEPENLSVPMVAVELVRARLERGSNKSQERELATPDWTERQLARGGLDQVLQAVV
DRRRPRETQVVAVLGKAGQGKSHWARTVSQAWARGQLPQYDFVFYVPCHCLDHPGDTYHL
QDLLCPPSLQPLVMDDEVLGHIVRQPDRVLLILDAFEELEAQDGLLHGPCGPLPPEPCSF
RGLLAGLFQRKLLRGCTLLLTARPRGRLTQSLSKADAIFEVPSFSTRQAQTYMRHYFENS
GTAGDKDKALGLLEGQPFLLTHSHSPALCRAVCQLSKALLEQGTETQLPCTLTGLYVGLL
GPAVRDSPPGALTELAKLAWELGRRHQSTLQGTQLLSEEVRTWAVTQGLVHPTMGTTETQ
LAFSSFLLQCFLGAVWLAQCNEIRDKELPQYLALTPRKKRPYDNWLEGVPRFLTGLVFQP
RAHCLGALMEPAVADRKRKVLTRYLKRLKLGSLRAGRLLELLHCAHETQEPGIWEHVVHQ
LPGHLSFLGTRLTPPDVHVLGRALETASQDFSLDLRQTGIEPSGLGNLVGLSCVTSFRAA
LSDTMVLWESLRHQGEPQLLQAAEEKFTLEPFKAKSPKDVEDLDSLVQTQRLRNPSEDAA
LDLPAIRDLKKLEFALGPVLGPQAFPTLVKILPAFSSLQHLDLDSLSENKIGDEGVSRLA
ATFTQLKVLETLNLSQNSITDVGACKLAEALPALAKSLLRLSSLYNNCICDAGARSLAQV
LPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDSRI
SLR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccaggctattctggctcaggtacggacgctgctctccagccagcagccc
aggcaagttcaggccctcctggatggcctgctggaagaagagctgctctcgcgggaatac
cactgtgcccttctccatgagcctgatggcgaggctctggcccgcaagatttccttgacc
ctgctggagaaagaggacttaggcttggcttactcaagctgggtctgcagcaggctgcag
gccccgacagtagagagggccaccagctacagggatcatggaggccatagtctgtgtgcc
accatggaactggggcttccggagggcagctacctggagctccttaacagcaatgtcgac
ccccttcacctctaccacttatctgacaatatggacctgcctggcgaggaggagacccag
ctcagctcagagccggacacagacaccatcaactgtgaccaggtcagcaagctgttgcag
tacatggaaggggatgaagagaccccggaggcctatgccaacatcgcggagctggatcag
tacgtgttccaggacacccagctggagggccacagcaaggacctcttcatagagcgcatt
gaaacagaggaaggcttcagtgagagcatggaggtccctgtagaagcaggagagaggtcc
cagaagagacgctccccagaagagcaccctatggatccaaagcacaggaagcttgctgag
ccctctatggtacccatgctgaccgggagcttcctgatggggccagcaagcatctccacc
atgccctacctaccacctgctctgtccaatcaagaaccagtgtcctgccatatacaccta
gagggagctactcagacatctgtgcccccctctaggtcctcaccgaactgtttggatctc
accattggacacatccagctccttcccaccctgccccagggactctggcaaatccagggg
gctggcacagggctccccagtgttctgatctaccatggtgagatgccccaggtcaaccat
gtgatcccttcaggcagccctactgtctccagcctccccaaatccccagaccggccatgc
tccaccagcccctttgcaccgtctgtggctgacctgcccagcatgccggaacctgcgctg
acctcccgcgtaaatgaggccgaggatacaacatccccctccccatgccaagagggtccc
gagtctcccatcaagcttccgaaatggccggcgtctgtggagcggttccagcactccctg
aaggacaagtaccaggtggagcccgagaacctgagtgttcccatggtagcggtggagctg
gtgcgggccaggttggaaagaggcagcaacaagagccaggaaagagagctagccactcca
gactggacagaacgccagctagcccgtggtggcctggatcaggtgcttcaggctgttgtc
gatcgccggcgaccacgagaaacacaggtggttgctgtgctgggcaaggctggccagggc
aagagccactgggcccgaacagtgagtcaggcctgggcccgtggccagttgccacaatat
gactttgtcttctatgtcccttgtcactgcttggatcacccaggagacacctaccacctg
caggatctgctctgtcccccaagcctgcagccactggtcatggatgatgaggtcttaggt
cacattgtgaggcaaccagaccgggtcctgctcattctagatgcttttgaggagctggag
gcccaagatggcctcctgcatggaccatgtggacctctgcccccagagccctgctccttc
cggggactgctggctgggcttttccagcggaagctgctacgcggctgtaccctgcttctc
acagcccggccccggggccgcttgactcagagcctgagcaaggcggatgccatctttgag
gtacccagcttctctaccagacaggcccagacctacatgagacactactttgaaaactca
gggacagcgggggacaaagacaaggccctgggcctccttgagggccaaccttttctcctc
acccatagtcatagccctgctctgtgccgggccgtgtgccagctctccaaggccctgctg
gaacagggcacagagacgcagctgccttgtacacttacaggactctatgtcggcctgcta
ggccctgcagtccgagacagtcctccaggggccttaactgagctggccaagctggcctgg
gagctgggtcgcaggcaccaaagcaccttgcaagggacccagttactatcagaggaggtg
aggacctgggccgtgacccaaggcttggtgcatcccaccatgggcaccacagagacccag
ctggccttctccagttttctgctgcagtgtttcctgggcgccgtgtggctggcacagtgc
aatgaaatcagagacaaagagttgccccagtacctggccttgaccccaaggaagaagaga
ccctatgacaactggctggagggtgtaccacgctttctgactgggttggttttccagcct
cgagcccactgcctgggagctctgatggagcctgcagtggcagacagaaaacgcaaggtt
cttaccaggtacctgaaacgcctgaagctggggtcgctgcgggctgggcgactgctggag
ctcctgcattgtgcccatgagacacaggaacctgggatttgggagcacgtggtacaccag
ctccctgggcacctctctttcctgggcacccggctcacacccccagatgtgcacgtgctg
ggcagggccctagagacggcaagccaggacttctccctggaccttcgtcaaactggcatt
gagccctctggactggggaacctcgtgggactcagctgtgtcaccagtttcagggccgcc
ttgagcgacacaatggtgctgtgggaatccctccggcatcagggagagccccagttactc
caggcagcagaggagaagttcacccttgagccgttcaaggccaagtctccaaaggatgtg
gaagacctggacagccttgtgcagacccagaggctaagaaacccctcagaggatgcagct
ctggatcttcctgccatccgggatcttaagaagctagagtttgcgttgggcccggtcctg
ggcccccaggctttccccacactggtaaaaatccttccagcattttcgtccctgcagcac
ctagacctggactcacttagtgagaacaagatcggggacgagggtgtgtcgcggctcgca
gccacctttacacagctcaaggtcctggagacactcaacctgtcccagaacagcatcacc
gatgtgggtgcctgcaagcttgcagaagccctgccggccctagccaagtccctcctaagg
ctgagcagcttgtacaataactgcatctgtgacgcaggagccaggagcctggcacaagtg
cttccagacatggtgtctctgcgggtgatggatgtccagttcaacaagttcacagctgcc
ggtgcccagcagctggcctccagccttcagaagtgccctcaagtagaaacgctggcaatg
tggacacccactatcccctttggggttcaggaacacttgcagcagctggattcccggatc
agcctgagatga
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integrated database retrieval system
