Mesocricetus auratus (golden hamster): 101825704
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Entry
101825704 CDS
T08306
Symbol
Shoc1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maua03036
]
101825704 (Shoc1)
Chromosome and associated proteins [BR:
maua03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101825704 (Shoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
101825704
NCBI-ProteinID:
XP_021091597
UniProt:
A0A3Q0DF20
LinkDB
All DBs
Position
Unknown
AA seq
1468 aa
AA seq
DB search
MFSALKYYAIDYLHENTVKERLYRDALLLQIPSCLNQDKNFIDDKYRRPWTRAISVPEMT
DNSVLEQWPARFCVEDIPEKKTVTGMMINGTFEEIVPSSNPNSPTGIENISSFLRKDYRE
DFTPIKCSPHYPGVKAEHQGLLIDEEMVFINKALDNHLPTVDTLLSRLKLYLVKDPLLDF
KEQLSGKDNFTECFSVRERLEPFVRDDFHMAEETFCKKKLPSVFPSDLEFFISTNLKQEV
PMLPSSELKEPLNSMPEIMEYVDENEKLFKRDLSTKHEFDAEDMKCNSTEILPIKSPSEP
ECNEPGELEIPLTSISLPRQHSPVSSLCAGFHTFPFSAVCKINLLSAGESTNKYCMLWQL
GSCRNSWVSFLLTVPRFQEPSSQYSLADMRNIFSVKGDDSLVINSAKSKRWRQATLNPIL
AETLEHLKAYLCHNGLSSKETKLEIFLPTKVLQLETWLEHQSRPLPIMPMSDKSTSVHRL
RPQKRPPSEREVPLLVLPDECVSVKRTKKEENPKNNQEVAARIMQNTDNGRVGLDNSVPS
VEPTSSSRIKASYDKKQSDLDLLSEFITLRSKYKTFTSDAEVTGHDQDNGFQDKEKCSLT
LQEESPVVSNNKTPEERFQERTDDVIEIQASDTQCQAYCLLEAAATPVLEKLACLCTYPA
ADWKFATVIFDQTRFFLKEQEKIINDAVHQGKNDDREVTFRHAALLHLLVTIRDVLLTCN
LDTALGYLSNAKDTYKSMLDSCLDNIWRQLKVLQFAKEKRPKTNYKIEELQRQILSRLQG
QQQIKVLIIIRMDSDGEKHLLIKTLKKMEGLTLTVLRSNERKDFLETTGVLKGTSACVVV
HNHSIGADFPWSSFSLVVEYNHVEHSCWAKHCGQLNVPFLVFKVILPDTALKRNTLLDRF
GGFLLEIQIPYIFFASEGLLNTPEILRLLESDYNITLVERCCCESLKLFGSTERYVVVTV
DEQTAVVVQDLEELYYEKASDNIIMRLMALSFQYSCCWIILYPKETLNSEYHLTEKTLHH
LSQIYAALASSGLKSEELDVKLIIAPGVEETALIIRQIADHNLMTSKRDPHEWLDKSWVE
VSPSQEEMNLLDFPCINPLVAQLMLHRAPSLHWLLTTSPAELQGLLPQVPAKVLKHFCSI
TSLFKISSSSKKKSPRISSLQEDMNPGGPFVSQSLAPVLQEHDEYYSYEDSEEAAQGGTS
SSLLELRETPRVLPFAASHSQARPRAASTCGPNTVQDNPFLIKKQSKKVAGHSFPSQDDS
ESGVFSLGLTQITCGPEMLPTDTQRRVIHNCVSYPKAKGSRNMQMSTPAFLPEASQPHHG
WDFKKNSDRKQIRSFSSSRGAQQTTYNKWYPQQDELPSDQPEHLWADLEDITYRHPAAGR
ELPSVPSWDSFCAPDFNVNQRGFKGLNFYQTAGNYLGQRRLPVPSSSWGDYETPTGLMYS
QVPQPKRQRLTYEKIPGRMDGQTRLRFL
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagcactcaaatactatgcaatagactatttacatgagaacacagttaaagaa
aggctttacagagatgctttattgcttcagatcccttcatgtttaaatcaagataaaaat
tttattgacgataaatataggcgtccatggacaagagctatttcagttccggagatgaca
gataattcggtcttggaacagtggccagcaaggttctgtgtggaggacattcctgagaaa
aagacagttacaggaatgatgattaatggcacatttgaggaaattgttccaagttccaat
cccaactctccaactgggatagagaatatcagctcgttcctcaggaaggactacagagaa
gactttacacctatcaagtgctccccacactacccgggagtgaaagcggagcaccaagga
ttacttattgatgaggaaatggtttttataaataaagcattggacaatcatctaccaact
gtggatactctcttgagtagactaaaactctatcttgttaaggatccgcttttagatttc
aaagaacaactctctggaaaggataatttcacggagtgtttctctgttcgagaacgtttg
gaaccttttgtgagagatgatttccatatggctgaggagaccttttgtaagaagaagcta
ccatcagtttttccttctgatcttgaattcttcatatctacaaaccttaaacaagaagtt
ccgatgctaccatcatcagaactgaaagagccattaaactcaatgcctgagataatggaa
tatgtagatgaaaatgaaaaacttttcaaaagagatctttctaccaagcatgaatttgat
gctgaggatatgaaatgcaactccacagagatcttacctattaaaagcccaagtgaacca
gagtgcaatgaaccaggagaattagaaataccactaaccagtataagcttaccaaggcaa
cattctccagtgagttcattatgtgcaggatttcatacatttccattttctgctgtgtgt
aaaattaatttacttagtgctggagaatcgactaataaatattgtatgctgtggcaactt
ggaagctgcagaaactcttgggtctcgttcttgcttacagttccaagatttcaagagccc
agcagtcagtattctcttgcagatatgaggaatatattttctgtcaaaggagacgacagc
cttgtgattaactctgcaaaatcaaagaggtggagacaagcaacactaaatccaatactg
gctgaaactctggagcatttgaaggcatacttgtgtcacaacggtctgtcttctaaggaa
actaagctggagatctttctgcctacaaaagtgcttcagctggaaacctggctagaacat
cagagtcgacccttgcccataatgcctatgagtgacaagtctaccagtgtgcacagatta
cgtccacagaagagaccaccttcagaaagagaagtgccgcttctggttttgcctgatgaa
tgtgtttctgttaaaagaacaaaaaaggaagaaaatccaaagaataaccaagaagtagct
gctagaataatgcagaacacagacaatggtcgtgttggacttgataactctgtgccgtct
gttgaaccaacttcctcttcacggattaaggcgtcttatgataaaaaacagagtgatttg
gaccttttgagcgagtttattactctgagaagtaaatacaagactttcacttcagatgct
gaagtcacaggccatgatcaagacaatggatttcaagataaagaaaagtgttctttgact
cttcaagaagaaagtcctgttgtttctaataacaaaactccagaggaaagatttcaagaa
aggacagatgatgtcatcgagatccaagcgtcagacacccagtgccaagcatactgtctc
ctagaagcagcagcgacacctgtcttagagaagcttgcttgcctctgtacttaccctgct
gctgattggaaatttgctactgtcatttttgaccaaacaagattcttcttaaaggaacaa
gaaaaaataataaatgatgctgttcaccaaggtaaaaatgatgacagagaagtaacattc
aggcatgctgctctcttacatcttctggtaacaatcagagatgtccttttaacatgcaac
ttggatacagcattaggatatttgtcaaatgcaaaagatacctacaaaagcatgttggac
tcctgcttggataacatttggagacagctgaaagttttacagtttgctaaggaaaaaagg
cctaaaaccaactataagattgaagaattacaacgtcagatactaagcaggttgcaaggt
caacaacaaattaaggtactgattataataagaatggactcagatggagaaaagcattta
cttattaaaacccttaagaaaatggaaggtttaacattaactgttttacgttcaaatgag
agaaaagattttctggaaactactggtgttttaaaaggtacgagtgcctgtgtggttgtg
cataatcacagtattggagcagattttccctggagcagcttctcactcgtggtggagtac
aatcacgtggaacactcttgctgggccaagcactgcgggcagctgaacgttcctttcctg
gtctttaaagtcattctgccagacacagcgctgaaaagaaacaccttgctggatagattt
ggtgggtttctcttggaaattcagatcccatacatattttttgcatctgaaggattgctt
aataccccagaaatactccggctgctggaatctgactataatatcacactggtggagaga
tgctgctgtgagtcactgaaactctttggaagcacagagcgttatgtagtggtgacagtt
gacgagcagactgctgtggttgtgcaggacctagaagaattatattatgagaaggcatca
gacaatatcattatgagattaatggcattgtcattccagtatagctgttgttggataata
ctatatcccaaggaaacattaaattcagagtaccatctcacagagaagaccctccatcac
ctctcacagatttatgcagctctggcttcctctggccttaaatctgaagaactggatgta
aagcttataattgccccaggagtagaagagactgctttaataattcgacaaatcgcagac
cacaatttaatgacatcgaagagagatcctcatgagtggttggataaatcctgggttgaa
gtttcaccatctcaggaagagatgaacctacttgatttcccatgtattaacccactggtg
gctcagctcatgttacacagagctccttccctgcactggctactgacaacatcgcccgct
gagctgcagggactccttccccaggttccagccaaagtactgaagcatttttgtagcatc
acttccttgtttaagattagttcttcctccaagaaaaagtcacctcgaatttcatcactt
caggaagatatgaatccaggtggtccctttgtttctcagagtttggctcctgtccttcag
gaacacgatgagtattattcctatgaagactctgaagaagcggcacagggcggtacaagc
tcctcccttctggagctaagagaaacaccgcgtgtgttaccatttgcagcatctcacagt
caggccaggccccgggcagcctccacctgtggccctaacacagtgcaggataaccctttt
ctaatcaagaagcaatcaaagaaagtggctgggcactccttcccaagtcaggatgattca
gaatcaggtgtcttctctctgggcctaacacaaataacctgtggacctgaaatgttgcca
actgatactcagaggagagttatccataattgtgtaagttatcctaaagcaaaaggaagc
agaaacatgcaaatgtccacccctgcctttttaccagaggcttctcaaccccaccatggt
tgggactttaagaaaaacagtgatagaaaacagattcggtcattcagttcaagccgtgga
gcacaacagactacctacaacaaatggtacccacaacaagatgagttacccagtgatcag
cctgagcatctgtgggccgacttggaagacatcacatacagacatccagctgctgggaga
gagcttccgtctgttcccagctgggattcattctgtgctcctgattttaatgtaaaccaa
agaggattcaaaggccttaatttctaccaaacagctgggaactacttgggacagagaaga
ctccctgtgccttcatctagctggggagattatgaaacaccaacaggcttaatgtactca
caagtaccacaacccaaaagacaacgtctaacgtatgaaaaaatccctggaagaatggat
ggacagacccggctgaggttcttatga
DBGET
integrated database retrieval system
