Mesocricetus auratus (golden hamster): 101826002
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Entry
101826002 CDS
T08306
Symbol
Pabpc5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03015
mRNA surveillance pathway
maua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101826002 (Pabpc5)
09123 Folding, sorting and degradation
03018 RNA degradation
101826002 (Pabpc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maua03019
]
101826002 (Pabpc5)
03041 Spliceosome [BR:
maua03041
]
101826002 (Pabpc5)
Messenger RNA biogenesis [BR:
maua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101826002 (Pabpc5)
mRNA cycle factors
Stress granule specific factors
101826002 (Pabpc5)
Spliceosome [BR:
maua03041
]
Complex C
Other components
Complex C specific factors
101826002 (Pabpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
101826002
NCBI-ProteinID:
XP_005072578
UniProt:
A0A1U7QF28
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGSGEPNTAGKKKKYLKAALYVGDLDPEVTEDMLYKKFRPAGPLRFTRICRDPVTHIPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ILFYFFSAFGNILSCKVVSDDNGSKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNIFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKSVLDLHGKAIDGKVLYVGRAQKKIERLAELRRRFERLKLKEKSRPP
GVPIYVKNLDETIDDEKLKEEFSSFGLISRAKVMMEVGQGKGFGVICFSSFEEATKAVDE
MNGRILGSKPLNVTLGQARHRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggggaacctaatactgctggcaagaaaaagaagtacctcaaggctgcactg
tatgttggtgacttggaccctgaagtgacagaggacatgctctacaagaagttcagaccg
gctggccctctacgcttcactagaatttgccgggacccagtgacccacatccccctgggt
tatggttatgttaacttccgctttcctgcagatgctgagtgggccttgaacacaatgaac
tttgatttaattaatggtaaaccatttcgcctcatgtggtcacagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaagaacttggataaatccatagataatagg
atcctgttttacttcttttctgcttttggtaacattctttcctgtaaggtagtaagtgat
gacaatggatctaagggttatgcctatgttcattttgatagccttgctgctgccaatagg
gctatctggcatatgaatggagtctggcttaacaaccgtcaggtgtatgtgggaagattc
aaatttcctgaagagagagcagctgaagtcagaaccagggatagagccacatttaccaat
atttttgtgaaaaaccttggagatgacatggatgacgaaaaactaaaggaacttttcagt
gaatacggaccaactgagagtgttaaagtaataagggatgccagtggaaaatctaaaggc
tttggatttgtcagatatgagacacatgaagctgcccaaaaatctgtgctagacctgcat
ggcaaggcaatagatgggaaagtcctgtatgtagggagagcacagaagaaaattgaacgc
ttggctgaattaaggcggagatttgaaaggctgaaattaaaagaaaaaagtagacccccg
ggagtgcctatctacgttaagaacctggatgagaccatcgatgatgaaaagctgaaggag
gaattttcttcatttggattaattagtcgagccaaagtgatgatggaagtgggacaaggc
aaagggtttggtgtcatctgcttttcttcttttgaagaggctaccaaagcagtggatgag
atgaatggtcgtatactaggctctaagccactgaatgtcactctgggccaagccaggcac
aggtggtga
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