Mesocricetus auratus (golden hamster): 101826767
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Entry
101826767 CDS
T08306
Symbol
Dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101826767 (Dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101826767 (Dhx16)
Enzymes [BR:
maua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101826767 (Dhx16)
Spliceosome [BR:
maua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101826767 (Dhx16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
SecA_DEAD
Cas3-like_C_2
Flavi_DEAD
nSTAND3
SRP54
Motif
Other DBs
NCBI-GeneID:
101826767
NCBI-ProteinID:
XP_012981825
UniProt:
A0A1U8CTN9
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MATPAGLERWVQEELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTETLDLGGPAR
DFALRLWSKVPRKAAVEKPARAAEREARALLEKNRSYKLLEDSESGDEAVGRDESSLQKK
RKRRKHLRKKHREEEEDEEEEVPEAGKGKTGGSKSPAEEKPASEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEVLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPKETRGQPARAVDIVEEESGAPGEEQRRWEEARLGAASLKFGARDAAAQEPKYQLVL
EEDETIEFVRAAQLQGDEDPSSVPPPSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQ
VLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE
VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI
KDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACV
VSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ
ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK
ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLM
HFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSC
SEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQ
WCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQGDYIRVRKAITSGYFYHTARLTR
SGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY
KAKELEDPHAKKMPKKVGKTREELG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcggggctggagcgctgggtgcaggaggagctgcactcggtgctgggg
ctgagcgagcggcacgtcgcgcagttcctgatcggcacggcgcagcgctgcgcctcggcc
gaggagtttgtgcagcggctgcgcgacaccgaaactctggacctgggcgggccggcgcgg
gacttcgcgctgaggctctggagcaaggtgccgcggaaggctgcggtagaaaagccagct
cgggcagctgagcgagaggcccgagccctgctggagaagaaccgatcttacaagctgctg
gaagacagcgagagcggcgacgaggccgtgggcagggacgagagcagcctccagaagaag
cggaagagacggaagcacctcaggaagaaacaccgcgaggaggaggaagacgaggaggaa
gaggttcccgaggcagggaaggggaagacagggggcagtaaatcacccgcggaggagaag
ccggcctcggaggatgagtgggagcggaccgagcgggagcggcttcaggacctggaggaa
cgggacgcctttgcagagcgggttcggcagagggacaaggaccgcacccggaatgtcctg
gaacgatcagataagaaggcttatgaagaggctcagaaacgcctcaagatggctgaggaa
gaccggaaagccatggtccccgagcttcgcaagaagtctcgtcgcgagtacctggcgaag
cgggagcgggagaagctggaggacctggaggcagaactggccgatgaggaggtcctgttc
ggggatgtggagctgagccgccacgagcgcagggagctcaagtacaagcgtcgcgtgagg
gacctggcccgggagtaccgggcagcgggcgagcaggagaagctggaggccactaatcga
taccatatgcccaaggagactcgaggacagccagcgcgagccgtggacatagtggaagag
gaatcgggtgccccgggagaggagcagcggcgctgggaggaggcccggctaggtgcagca
tccctcaagtttggggccagagacgccgcggcccaggagcccaagtaccagctggtgctg
gaggaggacgagaccatcgagttcgtccgtgccgcccagctccagggtgacgaggatccc
tcgtcagttccgcccccatcagcccaggcccagcagaaggaatccatccaggccgtccgc
cgcagcctgcccgtgttccccttccgagaggagctcctgacagccattgccaaccaccag
gtcctcatcatcgaaggcgagaccggctccgggaagaccacacagatcccgcagtacctc
ttcgaagagggctacacaaagaagggcatgaagatagcttgtacccagccccggagagtg
gcggccatgagtgtggccgcccgagtggcccgggagatgggagtgaagcttgggaatgag
gttggctacagcatccggtttgaggactgcacatcagagagaaccgttctccgctacatg
acggacgggatgctgctgcgggagttcctctctgaacccgaccttgcgagctacagtgtc
gtgatggtggatgaagctcatgagcgcaccctgcacacagacattctcttcgggttgatt
aaggatgttgctcgattccgacccgagctcaaggtcctggtagcttcagccacactggac
actgcccggttttccaccttcttcgatgacgcccccgtcttccgaatccctggacgcagg
tttccagttgacatcttctataccaaggccccagaggccgactacctggaagcctgtgtg
gtgtctgtgctgcagatccacgtgacccagccccctggggacatactggtattcctgacc
ggacaggaggagatcgaggcggcctgtgagatgctccaggaccgctgccgccgactgggt
tccaaaatccgggagctcctggtgctgcccatttatgccaacctaccctcggacatgcag
gcccgcatcttccagcccacaccccccggggcccgcaaggtggttgtggcaacaaacatc
gcagaaacgtcgctcaccatcgaaggcatcatttacgtgctggacccagggttctgcaag
cagaagagctacaatccccgcacgggcatggagtctctcacggtcacgccctgcagcaag
gcctccgccaaccagcgggctggccgtgcaggtcgggtggccgcagggaagtgcttccgc
ctgtacacagcctgggcctatcagcatgagctggaggagaccacggttcctgagatccag
aggacaagcctgggcaacgtggtgctgctgctgaagagcctagggatccatgacctgatg
cactttgacttcctggacccgccaccctacgagaccctgctgctggctttggaacagctt
tatgcactgggagccctcaaccacctgggagaactcaccacgtctggtcgaaagatggcc
gagctgcctgtggatcccatgctgtctaaaatgatcttggcctctgagaagtacagctgc
tcagaagagatcctgacagtggctgctatgctgtctgtcaacaactccatcttctaccgg
cccaaggacaaggtcgtccatgctgacaacgcccgtgtcaacttcttcctccctggtggg
gaccacctggtcctgctaaatgtgtacacacagtgggctgaaagtggctactcttcccag
tggtgctatgaaaactttgtacagttcagatccatgcgccgagcccgggacgtgcgggag
cagctggaggggctcttggagcgcgtggaagttggcttgacttcctgccaaggagactac
attcgtgtgcgcaaggccatcacttcgggttatttttaccacacagcaaggctgactcgg
agtggctaccgcacagttaagcagcagcagacggtgtttatccaccccaactcctctctc
tttgaacaacagccacgctggctgctctaccatgagcttgtcttgaccacaaaggagttc
atgagacaggtactggagattgagagcagctggctcctggaagtggccccccactactac
aaggccaaggaactagaagatccccatgcgaagaaaatgcccaaaaaagtaggcaagacc
cgagaagagctgggctag
DBGET
integrated database retrieval system
