Mesocricetus auratus (golden hamster): 101827036
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Entry
101827036 CDS
T08306
Symbol
Scarf1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101827036 (Scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maua04131
]
101827036 (Scarf1)
Membrane trafficking [BR:
maua04131
]
Endocytosis
Phagocytosis
Scavenger receptors
101827036 (Scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
101827036
NCBI-ProteinID:
XP_040605089
UniProt:
A0ABM2XQV1
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MEPGLAFPLLLLLSWGSQGSTLDPAGQHVCRGSSPSELQCCPGWRQKDEECTIPVCEGPD
ACKEEEVCVKPGLCRCKPGFFGAQCNSRCPGKYWGPDCRENCLCHPHGQCEAATGVCQCQ
PNYWGRLCESVCSCGPHGQCDQKTGLCHCDPGWWSPTCRRPCQCNRAARCDQVTGACLCP
SGWWGHRCSFKCSCHNSPCVQDSGKCTCLPGWWGPECTHRCQCVRGQCSVTSGHCSCPPG
FYGTRCELPCDPGHYGAQCRESCGHCKLNATCSPVTGTCESCRPGWNGTQCKQPCPPGTF
GERCHEQCPHCRLGEPCHAETGHCQRCDPGWLGHRCENPCPLGSFGEGCSSICPTCVQGT
CDAVTGECVCSAGYWGTSCNSSCPPGFHGNNCSTPCQCPEGLCHPVSGACQLGQHSRNAL
MAGILVPLLLLLVGLICCVYCCSATRLDPKDRPERNGAALFRMKQQVWGALTNLGSSLPC
GSLSNYKLPWVTVSHHDPEVPFNHSFIEPPSAGWASDDSFSSDPDSGEEDENHTYSVPPR
EGMVSVAQEESPAASLPGGPFPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFAPQNG
RNSGDLSSPIRKPKRLSRGAQPRPEGQEAEEPAGPEQANTEEDVPTTISPGDAATIHQPP
PTNRTVAECVETTNSSIQESSGSVATIYMLAGTPQKPEGPVLSVFRRLGNYQKDQAAPKV
KSAIPKPLRRSLGRNQGSPGLSQSSGSAPEAMLSGTIESTEVRPEEASRGLGDGTESLGT
VQEPVSGNSSLEQCSQKQVEEKEQEEPLYENVVPMSVPPQH
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggagccggggctggcgttccctctgctgctgctcttgtcttgggggagccagggatcc
acactagacccagctggtcagcacgtctgtagaggcagcagcccctctgagctccagtgc
tgcccaggctggaggcagaaagatgaagaatgcacaatccccgtctgcgaggggcctgat
gcctgcaaggaagaggaggtgtgcgtgaagccaggtctctgtcgatgtaaacctggattc
ttcggagcccagtgcaactcccgctgcccaggcaagtactggggccctgactgccgtgag
aactgcctttgccatccacatggccagtgtgaggcggccactggtgtgtgccagtgccag
cctaactactggggcagactctgtgagtccgtctgctcctgcggcccccatggacagtgc
gaccaaaagacaggtttatgtcactgtgatcctggatggtggtcacccacgtgtcgtcgc
ccatgccaatgcaaccgagcagcacgctgtgaccaggtcactggagcctgcctgtgcccg
tctggatggtggggccaccgctgcagcttcaagtgcagctgtcacaactcgccttgcgtg
caggactctggcaagtgtacctgcctgccgggctggtggggtcctgagtgtactcacagg
tgccagtgtgttcgaggccagtgcagtgttacttctggccactgttcctgccctcctggt
ttctatggaacccgctgtgagctgccctgcgaccctggtcactatggagcacagtgcaga
gaaagctgtggccactgcaagctgaatgcaacgtgctctccagtcacaggcacctgtgag
tcctgcaggcctggttggaatgggactcagtgcaagcagccgtgtcctcctggaaccttt
ggtgagaggtgccatgagcagtgcccccactgccggcttggagagccctgtcatgcagaa
actgggcactgccagcgctgtgaccctggttggttggggcacagatgtgagaatccctgt
ccccttggttcctttggggagggctgcagctccatctgccccacctgtgttcaggggacc
tgcgatgctgtgacaggggaatgtgtctgcagtgctggctactgggggaccagctgcaat
agttcctgcccacctggcttccatggaaacaactgctctaccccctgccaatgcccagag
gggctctgccaccctgtgtccggggcctgtcaactgggccaacatagcagaaacgccctc
atggcgggcatcttggtacctctgttactgctcctggtgggtctcatctgctgcgtttac
tgctgctcagccacccgactggaccccaaggacaggccagagagaaatggagctgccttg
ttcagaatgaagcagcaggtgtggggggccctcaccaacctgggctcttcactgccctgt
ggctccctcagcaactacaagctaccctgggtgacggtttctcaccacgacccggaggtc
cccttcaaccacagctttatcgagccaccctctgctggctgggcgtctgatgattccttc
tcttctgaccctgactctggagaagaggacgaaaatcacacctactccgtgccacctcga
gaagggatggtctctgtggcccaagaggagtcaccagcggccagccttcctggaggtccc
ttccctccccctgaggatgcttccacaccattccccatcccacgcacctccagcctggct
agggccaagaggccgtctgtctcctttgctgaaggcactaagtttgcaccgcagaatggc
cgaaactctggggatctctccagccccatacgaaaacccaagagactctcgagaggtgct
cagccacgtcctgaagggcaggaggctgaggaacctgcaggcccagaacaagcaaacaca
gaggaggatgttcctactaccataagccctggagatgctgctactattcaccaaccccca
cctactaaccggacagtggctgagtgtgtggaaaccaccaatagcagcatccaggagagc
tcaggctctgtggccacaatctatatgctggcagggacaccccagaaaccggagggccct
gtcttgtctgtcttccgtcgtttgggaaactaccagaaagaccaggcagcacccaaggtc
aagagtgccatccctaagcctttacgtcgatctctgggtcggaaccagggcagccctggg
ctctcccagagctctggctcagctccagaagccatgctctctggaaccatagagtccaca
gaagttaggccagaggaagcatccagaggtctgggagatggcactgagagcttagggaca
gttcaggagccagtctctgggaacagctccctggaacagtgttcccagaagcaggttgaa
gagaaagagcaggaggagcccctgtatgagaatgttgtgcccatgtctgtgccgccacag
cactga
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