Mesocricetus auratus (golden hamster): 101827309
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Entry
101827309 CDS
T08306
Symbol
Prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101827309 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101827309 (Prpf8)
Spliceosome [BR:
maua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101827309 (Prpf8)
Complex C
U5 SnRNP specific factors
101827309 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
101827309
NCBI-ProteinID:
XP_040605087
UniProt:
A0ABM2XQV0
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgtttccttaccgagggccgggtaacccggttcccggccctctagccccg
ctgccggactacatgtcagaggagaagctgcaggagaaagctcgaaaatggcagcaattg
caagccaagcgctatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgcccccagaacatgtcaggaagatcatacgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtctatttgggagccctcaagtacatgcctcatgcagttctc
aaactcctggagaacatgcccatgccttgggagcagattcgcgacgtgcctgttctgtac
cacatcactggggccatttcctttgtcaatgagattccctgggtcatcgagccagtttac
atctcccagtgggggtccatgtggatcatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccctcctttcgatgatgaggaaccgcccctggattatgctgac
aacatcttagatgttgagcctctggaagccattcagctagagctggaccctgaggaggat
gcccctgtgctggactggttctatgaccaccagccactgagagacagtaggaagtatgtt
aatggttccacttaccaacgctggcagttcacattgcctatgatgtccactctctatcga
ttggccaatcagcttctgactgacttggtggatgacaactacttctatctgtttgatctg
aaggccttctttacctctaaggcactcaatatggccattcctggaggacccaaatttgaa
cctcttgttcgggacatcaacctacaggatgaagactggaatgaattcaatgatatcaat
aagatcatcatccgtcagcctattcgtactgagtacaagattgctttcccttacctgtat
aacaacctcccacaccatgtccacctgacctggtaccacactcctaacgttgtgttcatc
aagactgaggatcctgatttgccagctttctactttgatcctctgatcaacccaatctct
catcgacactcagtcaagagccaggaaccactgcctgatgatgatgaggaatttgaactc
cctgagtttgtggagccctttctgaaggacacacccctctatacagataatacagccaat
ggcattgccctgctctgggcaccgcggccctttaacttacgctctggtcgtacacgccgg
gccctggacatacctcttgtcaagaactggtatcgggagcactgtcctgctgggcagcct
gtgaaggtgcgagtctcctatcagaagctgcttaagtactatgtgctgaatgccctcaaa
catcggcctcctaaagcacaaaagaagaggtatctgttccgctcgttcaaagctaccaaa
ttctttcagtccacaaagctagactgggtagaggtggggctgcaggtctgccgccagggc
tacaacatgctcaaccttctcattcaccggaagaacctcaactacctgcacttggactat
aacttcaacctgaagcctgtcaagacgctcaccaccaaggaaagaaagaaatctcgtttt
gggaatgctttccatctgtgtcgggaagtattgcgtttaactaagctggttgtggatagt
catgtgcaataccgcttgggcaatgtggatgccttccagctggcagatggattgcagtat
atatttgcccacgtggggcagttaaccggcatgtatcgatacaaatacaagctgatgagg
cagatccgcatgtgcaaggacttgaagcatctcatctattaccgcttcaatacgggccct
gtagggaaaggccctggctgtggtttctgggctgctggctggcgagtctggctgtttttc
atgcgtggaattacccctttgctagagcgatggctgggcaacctcctggcccgacagttt
gaaggccgtcactcaaagggggtggcaaagacagtaacaaagcaaagagtggagtcccat
tttgaccttgagcttcgggcagctgtgatgcacgatattctggacatgatgcctgaaggc
atcaaacagaacaaggcccgaacaattctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtcccgggactgccaacacctatagagaatatgattctt
cggtacgttaaggccaaggcggattggtggaccaatactgctcactacaaccgtgaacga
atccgccgtggggccaccgtagacaagactgtttgcaaaaagaacctgggccgcctcacc
cgcctgtacctgaaggcagaacaggagcggcagcacaattacctgaaggatgggccttac
attacagcagaagaagccgtggcagtgtatactaccactgtgcattggttggaaagccgt
agattctctcccattccattccctccactctcctacaagcatgataccaagttgctcatc
ttagctctggaacgcctcaaggaagcttatagtgtaaagtctaggttaaaccagtctcag
agggaggagctgggtctgatcgagcaagcctacgacaacccccatgaggccttgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaggaagtgggcattgagtttatggat
ctctatagccacctggtgccagtatatgacgtggagcccctggagaaaataactgacgct
tacctggaccagtacctgtggtatgaagcagataagcgccgtcttttcccaccttggatc
aagcctgctgacacagaaccacctccactgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagaccagtgagggcgagtgcaatgtcatgttggagtcccgc
tttgagaagatgtatgaaaagattgatttgaccctgcttaataggctgctgcgactcatt
gtggatcacaatatagctgactacatgacagccaagaacaatgttgtcattaactataag
gacatgaaccatacaaattcatatggaatcatcagaggcctgcagtttgcctctttcatt
gtacagtactatggcttggtgatggatttgcttgtattgggattgcaccgcgccagtgag
atggctgggcctcctcagatgccaaacgactttctcagtttccaggacatagccactgag
gctgcgcacccaatccgactcttctgtagatacattgatcgcatccatattttcttcagg
ttcacagccgatgaagctcgggatctgatccaacgttacctgacagagcatccagaccct
aataatgaaaacattgttggctacaataacaagaaatgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaaaaaccgg
ttgccacgatcggtgactacagtacagtgggagaatagctttgtgtctgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctgcctaagtgc
cgaaccagctatgaagaattcacccacaaggatggggtctggaacctacagaatgaggtt
actaaggagcggacagcgcagtgtttcctgcgtgtggatgatgagtcaatgcaacgcttc
cataaccgagttcgtcagattctaatggcctctggctccaccacctttaccaagattgtg
aataagtggaatacagctctcatcggccttatgacatattttcgagaggctgtagtgaat
actcaagaactcctagacttattggtaaagtgtgaaaacaagatccagacacgtatcaag
attggattgaactccaagatgccgagccggttcccccctgttgtgttctacacccctaag
gagctgggtgggcttggcatgctctcaatgggccatgtgctcatcccccagtctgacctc
aggtggtccaagcaaaccgatgtgggtatcacccacttccgttcaggaatgagtcatgaa
gaagaccaactgattcccaatttataccgctacatacagccgtgggagagtgagttcatt
gactctcaacgggtctgggctgagtatgcactcaagagacaggaggctattgctcagaac
agacggttgactttagaagacttagaagattcatgggatcgaggcattccacggatcaat
accctgttccagaaggaccggcacacattagcttatgataaaggctggcgtgtccgaact
gacttcaagcagtaccaggttttgaagcagaaccccttctggtggacacatcagcggcat
gatggcaagctctggaacctcaacaactaccgcacagatatgattcaagccctaggtggc
gtggagggcattctggagcacactctcttcaagggcacttacttccctacctgggaaggc
ctgttctgggagaaagccagtggctttgaggaatccatgaagtggaagaagctaactaat
gctcagcgatcaggattaaaccagattcctaatcgtagattcaccctttggtggtccccc
acaatcaatcgagctaatgtatatgtaggcttccaggtgcagctggacttgacaggaatc
tttatgcatggcaagatccccacactgaagatctctctcatccagatattccgagctcac
ctgtggcagaagatccatgagagcattgtgatggacttatgtcaggtctttgaccaggaa
ttggatgcattggaaattgagacagtacaaaaggagacaatccatccccgaaaatcctat
aagatgaactcttcctgtgctgatatactactttttgcttcctacaagtggaatgtctcc
cgaccctcactgctggcagactccaaggacgtgatggacagcacaactacacagaagtac
tggattgacatccagttacgatggggagactatgattcccatgatattgagcgctatgcc
cgagccaaattcctggattataccacagacaacatgagtatctacccttctcccacaggt
gtgctcattgccattgacctggcctataatctgcacagtgcctatggaaactggtttcca
ggcagcaaaccccttatacagcaggctatggccaagatcatgaaggcaaatcctgccttg
tatgtattgcgtgaacggatccgcaaaggactgcagctatattcatctgagcccactgag
ccttatctgtcctctcagaactatggtgaactcttctctaaccagattatctggtttgtg
gatgataccaatgtctatagagtgaccatccacaagacctttgaggggaacttgacaacc
aaacccatcaatggggccatcttcatctttaacccacgcacagggcagcttttcctcaag
ataatccatacatctgtgtgggctggacagaaacgtttgggtcagttggccaagtggaag
acagctgaggaagtggctgccctgattcgatctctgcctgtagaggagcagcctaaacag
atcattgtcaccaggaagggcatgctggatccattggaggtgcacttgctggacttcccc
aatattgtgatcaaagggtcggagctccagctccccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccacagagccccagatggttctcttcaacctctac
gatgactggctcaagactatctcgtcctacacggctttctcccgtctcatcctgatcctg
cgtgctttgcatgtgaacaatgatagggcaaaggtgatcctgaagccagacaaaaccact
attacagagccccaccacatctggcccacgctgacggacgaggagtggatcaaggtggag
gtgcagctgaaggacctgatcttggccgactatggcaagaaaaacaatgtgaatgtggca
tcactgacacagtcagaaattcgagacatcatcctaggcatggagatctcggcaccatca
cagcagcggcagcagatagctgagattgagaagcagaccaaggaacagtcacagctcact
gccacgcagactcgaactgtcaacaagcatggtgatgagattatcacctccaccactagc
aactatgagacccagaccttctcatcaaagactgaatggagagtcagggccatctctgct
gccaacctgcatctacggaccaatcacatttatgtttcatctgatgacattaaggagact
ggttatacttacatccttcccaagaatgtgcttaagaagttcatctgcatatctgatctc
cgtgcccaaattgcagggtacctatatggggtgagtcctccagataaccctcaggtgaag
gagatccgctgtattgtgatggtgccacagtggggcactcaccagactgtgcatctgccc
agccagctaccccagcatgaatacctcaaggagatggaacccttaggttggatccacact
caacccaatgagtctccccagctatcaccccaagatgtcaccactcatgccaagatcatg
gctgacaacccatcttgggatggcgagaagacaattatcatcacctgcagcttcacccca
ggttcctgcacactgacagcctacaagttgacccccagtggctatgagtggggccgacag
aacactgacaaaggcaacaaccccaaaggctacctgccctcgcactacgagagggtccag
atgctcctgtcagaccgattcctcggcttctttatggttcctgcccagtcctcctggaac
tacaactttatgggtgttcggcatgatcccaacatgaaatacgagctgcagctggcaaac
cccaaggaattctaccatgaggtccatagaccctcccacttcctcaacttcgccctcctg
caggagggtgaggtctactctgcagacagagaggatctctacgcctag
DBGET
integrated database retrieval system
