Mesocricetus auratus (golden hamster): 101827973
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Entry
101827973 CDS
T08306
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
maua
Mesocricetus auratus (golden hamster)
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maua03041
]
101827973 (Rbm39)
Spliceosome [BR:
maua03041
]
Common components
Common spliceosomal components
General mRNP proteins
101827973 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
101827973
NCBI-ProteinID:
XP_040588926
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcgatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagcgaaagaggagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaacggaaacgaagcagaagcaaagaaaggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaggaaagggatgcaaggacagttttctgcatgcaactg
gcagcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaatcgcctatgtggaa
tttgttgatgttagttcagttcctctagcaattggattaactggccaacgtgttttagga
gtgccaattatagtacaggcctcacaggcagaaaaaaatagagctgcagcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctctatgtgggctccttacattttaac
ataactgaagatatgcttcgtgggatctttgagcctttcggaaggattgaaagtattcag
ctcatgatggatagtgaaacaggccggtctaagggatacggattcattacattttctgac
tcagaatgtgccaaaaaagctttggaacagcttaatggatttgaactagctgggaggcca
atgaaagttggtcatgttactgaacgaaccgatgcttctagtgctagttcgtttttggac
agtgatgaactagaaagaactggaattgacttgggaacaactggtcgtcttcaattaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacagcaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagaccgaagcctcagctttagctgcagctgcatctgttcaacca
cttgcaacacaatgttttcaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgttattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaacgtgtatgtgaagtgcccatct
attgctgcagctattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacataccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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